User profiles for Kenji Shimada

Kenji Shimada

Carnegie Mellon University
Verified email at cmu.edu
Cited by 8307

A survey of computational approaches to three-dimensional layout problems

J Cagan, K Shimada, S Yin - Computer-Aided Design, 2002 - Elsevier
The component layout or packaging problem requires efficient search of large, discontinuous
spaces. This survey paper reviews the state-of-the-art in product layout algorithms. The …

Bubble mesh: automated triangular meshing of non-manifold geometry by sphere packing

K Shimada, DC Gossard - Proceedings of the third ACM symposium on …, 1995 - dl.acm.org
This paper presents a new computational method for fully automated triangular mesh generation,
consistently applicable to wire-frame, surface, solid, and nonmanifold geometries. The …

Chromosome dynamics in the yeast interphase nucleus

P Heun, T Laroche, K Shimada, P Furrer, SM Gasser - Science, 2001 - science.org
Little is known about the dynamics of chromosomes in interphase nuclei. By tagging four
chromosomal regions with a green fluorescent protein fusion to lac repressor, we monitored the …

[HTML][HTML] Ino80 chromatin remodeling complex promotes recovery of stalled replication forks

K Shimada, Y Oma, T Schleker, K Kugou, K Ohta… - Current Biology, 2008 - cell.com
Background Chromatin remodeling complexes facilitate the access of enzymes that mediate
transcription, replication or repair of DNA by modulating nucleosome position and/or …

Edaravone, a free radical scavenger, inhibits MMP-9–related brain hemorrhage in rats treated with tissue plasminogen activator

…, KT Kitazato, M Uno, Y Tada, T Kinouchi, K Shimada… - Stroke, 2009 - Am Heart Assoc
Background and Purpose— Intracerebral hemorrhage, induced by recombinant tissue
plasminogen activator (rtPA) in ischemic stroke, is attributable to the increased activity of matrix …

ORC and the intra-S-phase checkpoint: a threshold regulates Rad53p activation in S phase

K Shimada, P Pasero, SM Gasser - Genes & development, 2002 - genesdev.cshlp.org
The intra-S-phase checkpoint in yeast responds to stalled replication forks by activating the
ATM-like kinase Mec1 and the CHK2-related kinase Rad53, which in turn inhibit spindle …

Application of a modified k–ε model to the prediction of aerodynamic characteristics of rectangular cross-section cylinders

K Shimada, T Ishihara - Journal of fluids and structures, 2002 - Elsevier
Aerodynamic characteristics of rectangular cylinders of infinite length and various breadth-to-depth
ratios ranging from B/D=0·6 to 8·0 were investigated numerically by a two-layerk –ε …

[HTML][HTML] DNA polymerase stabilization at stalled replication forks requires Mec1 and the RecQ helicase Sgs1

JA Cobb, L Bjergbaek, K Shimada, C Frei… - The EMBO …, 2003 - embopress.org
To ensure proper replication and segregation of the genome, eukaryotic cells have evolved
surveillance systems that monitor and react to impaired replication fork progression. In …

Surface mesh segmentation and smooth surface extraction through region growing

M Vieira, K Shimada - Computer aided geometric design, 2005 - Elsevier
Laser range-scanners are used in fields as diverse as product design, reverse engineering,
and rapid prototyping to quickly acquire geometric surface data of parts and models. This …

Automatic triangular mesh generation of trimmed parametric surfaces for finite element analysis

K Shimada, DC Gossard - Computer Aided Geometric Design, 1998 - Elsevier
This paper describes a new computational method for fully automated triangulation of the
trimmed parametric surfaces used in finite element analysis. The method takes as input the …