User profiles for Konstantin Khodosevich
Konstantin KhodosevichBRIC, University of Copenhagen Verified email at bric.ku.dk Cited by 2793 |
Cell segmentation in imaging-based spatial transcriptomics
Single-molecule spatial transcriptomics protocols based on in situ sequencing or
multiplexed RNA fluorescent hybridization can reveal detailed tissue organization. However, …
multiplexed RNA fluorescent hybridization can reveal detailed tissue organization. However, …
Tracing the origin of adult intestinal stem cells
…, LL Thuesen, KJ Hare, TH Pers, K Khodosevich… - Nature, 2019 - nature.com
Adult intestinal stem cells are located at the bottom of crypts of Lieberkühn, where they
express markers such as LGR5 1 , 2 and fuel the constant replenishment of the intestinal …
express markers such as LGR5 1 , 2 and fuel the constant replenishment of the intestinal …
[HTML][HTML] A community-based transcriptomics classification and nomenclature of neocortical cell types
To understand the function of cortical circuits, it is necessary to catalog their cellular diversity.
Past attempts to do so using anatomical, physiological or molecular features of cortical …
Past attempts to do so using anatomical, physiological or molecular features of cortical …
Upper cortical layer–driven network impairment in schizophrenia
…, I Adorjan, PV Kharchenko, K Khodosevich - Science …, 2022 - science.org
Schizophrenia is one of the most widespread and complex mental disorders. To
characterize the impact of schizophrenia, we performed single-nucleus RNA sequencing (snRNA-seq) …
characterize the impact of schizophrenia, we performed single-nucleus RNA sequencing (snRNA-seq) …
Joint analysis of heterogeneous single-cell RNA-seq dataset collections
Single-cell RNA sequencing is often applied in study designs that include multiple individuals,
conditions or tissues. To identify recurrent cell subpopulations in such heterogeneous …
conditions or tissues. To identify recurrent cell subpopulations in such heterogeneous …
[HTML][HTML] Identification of epilepsy-associated neuronal subtypes and gene expression underlying epileptogenesis
…, PV Kharchenko, K Khodosevich - Nature …, 2020 - nature.com
Epilepsy is one of the most common neurological disorders, yet its pathophysiology is
poorly understood due to the high complexity of affected neuronal circuits. To identify …
poorly understood due to the high complexity of affected neuronal circuits. To identify …
[HTML][HTML] Neuronal survival in the brain: neuron type-specific mechanisms
U Pfisterer, K Khodosevich - Cell death & disease, 2017 - nature.com
Neurogenic regions of mammalian brain produce many more neurons that will eventually
survive and reach a mature stage. Developmental cell death affects both embryonically …
survive and reach a mature stage. Developmental cell death affects both embryonically …
[PDF][PDF] Diazepam binding inhibitor promotes progenitor proliferation in the postnatal SVZ by reducing GABA signaling
J Alfonso, C Le Magueresse, A Zuccotti, K Khodosevich… - Cell stem cell, 2012 - cell.com
The subventricular zone (SVZ) of the lateral ventricles is the largest neurogenic niche of the
postnatal brain. New SVZ-generated neurons migrate via the rostral migratory stream to the …
postnatal brain. New SVZ-generated neurons migrate via the rostral migratory stream to the …
Increased subventricular zone-derived cortical neurogenesis after ischemic lesion
…, M Schwaninger, H Monyer, K Khodosevich - Experimental …, 2010 - Elsevier
In adult rodents stroke enhances neurogenesis resulting in the addition of neurons to
forebrain regions such as striatum or cortex where postnatal neurogenesis under normal …
forebrain regions such as striatum or cortex where postnatal neurogenesis under normal …
[HTML][HTML] Neurodevelopmental disorders—high-resolution rethinking of disease modeling
K Khodosevich, CM Sellgren - Molecular Psychiatry, 2023 - nature.com
Neurodevelopmental disorders arise due to various risk factors that can perturb different
stages of brain development, and a combinatorial impact of these risk factors programs the …
stages of brain development, and a combinatorial impact of these risk factors programs the …