User profiles for Konstantin Khodosevich

Konstantin Khodosevich

BRIC, University of Copenhagen
Verified email at bric.ku.dk
Cited by 2793

Cell segmentation in imaging-based spatial transcriptomics

…, RJ Xu, RA Soldatov, P Cadinu, K Khodosevich… - Nature …, 2022 - nature.com
Single-molecule spatial transcriptomics protocols based on in situ sequencing or
multiplexed RNA fluorescent hybridization can reveal detailed tissue organization. However, …

Tracing the origin of adult intestinal stem cells

…, LL Thuesen, KJ Hare, TH Pers, K Khodosevich… - Nature, 2019 - nature.com
Adult intestinal stem cells are located at the bottom of crypts of Lieberkühn, where they
express markers such as LGR5 1 , 2 and fuel the constant replenishment of the intestinal …

[HTML][HTML] A community-based transcriptomics classification and nomenclature of neocortical cell types

…, R Hodge, J Huang, R Huda, K Khodosevich… - Nature …, 2020 - nature.com
To understand the function of cortical circuits, it is necessary to catalog their cellular diversity.
Past attempts to do so using anatomical, physiological or molecular features of cortical …

Upper cortical layer–driven network impairment in schizophrenia

…, I Adorjan, PV Kharchenko, K Khodosevich - Science …, 2022 - science.org
Schizophrenia is one of the most widespread and complex mental disorders. To
characterize the impact of schizophrenia, we performed single-nucleus RNA sequencing (snRNA-seq) …

Joint analysis of heterogeneous single-cell RNA-seq dataset collections

…, Y Lozinsky, S Demharter, K Khodosevich… - Nature …, 2019 - nature.com
Single-cell RNA sequencing is often applied in study designs that include multiple individuals,
conditions or tissues. To identify recurrent cell subpopulations in such heterogeneous …

[HTML][HTML] Identification of epilepsy-associated neuronal subtypes and gene expression underlying epileptogenesis

…, PV Kharchenko, K Khodosevich - Nature …, 2020 - nature.com
Epilepsy is one of the most common neurological disorders, yet its pathophysiology is
poorly understood due to the high complexity of affected neuronal circuits. To identify …

[HTML][HTML] Neuronal survival in the brain: neuron type-specific mechanisms

U Pfisterer, K Khodosevich - Cell death & disease, 2017 - nature.com
Neurogenic regions of mammalian brain produce many more neurons that will eventually
survive and reach a mature stage. Developmental cell death affects both embryonically …

[PDF][PDF] Diazepam binding inhibitor promotes progenitor proliferation in the postnatal SVZ by reducing GABA signaling

J Alfonso, C Le Magueresse, A Zuccotti, K Khodosevich… - Cell stem cell, 2012 - cell.com
The subventricular zone (SVZ) of the lateral ventricles is the largest neurogenic niche of the
postnatal brain. New SVZ-generated neurons migrate via the rostral migratory stream to the …

Increased subventricular zone-derived cortical neurogenesis after ischemic lesion

…, M Schwaninger, H Monyer, K Khodosevich - Experimental …, 2010 - Elsevier
In adult rodents stroke enhances neurogenesis resulting in the addition of neurons to
forebrain regions such as striatum or cortex where postnatal neurogenesis under normal …

[HTML][HTML] Neurodevelopmental disorders—high-resolution rethinking of disease modeling

K Khodosevich, CM Sellgren - Molecular Psychiatry, 2023 - nature.com
Neurodevelopmental disorders arise due to various risk factors that can perturb different
stages of brain development, and a combinatorial impact of these risk factors programs the …