User profiles for Kuan-Hao Chao
 | Kuan-Hao ChaoComputer Science Ph.D. Candidate, Johns Hopkins University Verified email at jhu.edu Cited by 64 |
[HTML][HTML] CHESS 3: an improved, comprehensive catalog of human genes and transcripts based on large-scale expression data, phylogenetic analysis, and protein …
CHESS 3 represents an improved human gene catalog based on nearly 10,000 RNA-seq
experiments across 54 body sites. It significantly improves current genome annotation by …
experiments across 54 body sites. It significantly improves current genome annotation by …
The first gapless, reference-quality, fully annotated genome from a Southern Han Chinese individual
We used long-read DNA sequencing to assemble the genome of a Southern Han Chinese
male. We organized the sequence into chromosomes and filled in gaps using the recently …
male. We organized the sequence into chromosomes and filled in gaps using the recently …
sangeranalyseR: simple and interactive processing of sanger sequencing data in R
sangeranalyseR is feature-rich, free, and open-source R package for processing Sanger
sequencing data. It allows users to go from loading reads to saving aligned contigs in a few …
sequencing data. It allows users to go from loading reads to saving aligned contigs in a few …
[HTML][HTML] EASTR: Identifying and eliminating systematic alignment errors in multi-exon genes
Accurate alignment of transcribed RNA to reference genomes is a critical step in the analysis
of gene expression, which in turn has broad applications in biomedical research and in the …
of gene expression, which in turn has broad applications in biomedical research and in the …
[PDF][PDF] WGT: Tools and algorithms for recognizing, visualizing, and generating Wheeler graphs
A Wheeler graph represents a collection of strings in a way that is particularly easy to index
and query. Such a graph is a practical choice for representing a graph-shaped pangenome, …
and query. Such a graph is a practical choice for representing a graph-shaped pangenome, …
A feature extraction free approach for protein interactome inference from co-elution data
… Yu-Hsin Chen and Kuan-Hao Chao contributed equally to this work and should be …
Kuan-Hao Chao is a PhD student for Computational Biology at Johns Hopkins University. His …
Kuan-Hao Chao is a PhD student for Computational Biology at Johns Hopkins University. His …
RNASeqR: an R package for automated two-group RNA-Seq analysis workflow
… Kuan-Hao Chao is currently working toward the undergraduate degree in the Department
of Electrical Engineering at the National Taiwan University (NTU). His research interests …
of Electrical Engineering at the National Taiwan University (NTU). His research interests …
[HTML][HTML] Splam: a deep-learning-based splice site predictor that improves spliced alignments
The process of splicing messenger RNA to remove introns plays a central role in creating
genes and gene variants. Here we describe Splam, a novel method for predicting splice …
genes and gene variants. Here we describe Splam, a novel method for predicting splice …
EASTR: Correcting systematic alignment errors in multi-exon genes
Accurate alignment of transcribed RNA to reference genomes is a critical step in the analysis
of gene expression, which in turn has broad applications in biomedical research and in the …
of gene expression, which in turn has broad applications in biomedical research and in the …
[PDF][PDF] Linguistic petrographical data porosity categorization with three-layer bidirectional neural network
KH Chao - users.cecs.anu.edu.au
Reservoir characterization plays an essential role in petroleum geology. However, most of
the linguistic petrographical data has no quantitative measurements and is hard to be …
the linguistic petrographical data has no quantitative measurements and is hard to be …