Target-enrichment strategies for next-generation sequencing

L Mamanova, AJ Coffey, CE Scott, I Kozarewa… - Nature …, 2010 - nature.com
We have not yet reached a point at which routine sequencing of large numbers of whole
eukaryotic genomes is feasible, and so it is often necessary to select genomic regions of interest …

Cross-tissue immune cell analysis reveals tissue-specific features in humans

…, L Mamanova, N Huang, PA Szabo, L Richardson… - Science, 2022 - science.org
Despite their crucial role in health and disease, our knowledge of immune cells within human
tissues remains limited. We surveyed the immune compartment of 16 tissues from 12 adult …

[HTML][HTML] Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics

…, W Luo, H Maatz, E Madissoon, L Mamanova… - Nature medicine, 2021 - nature.com
Angiotensin-converting enzyme 2 (ACE2) and accessory proteases (TMPRSS2 and CTSL)
are needed for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) cellular entry…

[HTML][HTML] Local and systemic responses to SARS-CoV-2 infection in children and adults

…, L Mamanova, L Bolt, L Richardson… - Nature, 2022 - nature.com
It is not fully understood why COVID-19 is typically milder in children 1 , 2 – 3 . Here, to examine
the differences between children and adults in their response to SARS-CoV-2 infection, …

[HTML][HTML] Cells of the human intestinal tract mapped across space and time

…, S Pritchard, L Bolt, SF Vieira, L Mamanova… - Nature, 2021 - nature.com
The cellular landscape of the human intestinal tract is dynamic throughout life, developing
in utero and changing in response to functional requirements and environmental exposures. …

A cell atlas of human thymic development defines T cell repertoire formation

…, KT Mahbubani, K Polanski, L Mamanova, L Bolt… - Science, 2020 - science.org
INTRODUCTION The thymus is the critical organ for T cell development and T cell receptor (TCR)
repertoire formation, which shapes the landscape of adaptive immunity. T cell …

Decoding human fetal liver haematopoiesis

…, G Reynolds, M Mather, C Moldovan, L Mamanova… - Nature, 2019 - nature.com
Definitive haematopoiesis in the fetal liver supports self-renewal and differentiation of
haematopoietic stem cells and multipotent progenitors (HSC/MPPs) but remains poorly defined in …

Single-cell transcriptomes from human kidneys reveal the cellular identity of renal tumors

…, C Guzzo, N Richoz, L Mamanova… - science, 2018 - science.org
Messenger RNA encodes cellular function and phenotype. In the context of human cancer, it
defines the identities of malignant cells and the diversity of tumor tissue. We studied 72,501 …

Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral …

…, W Luo, H Maatz, E Madissoon, L Mamanova… - BioRxiv, 2020 - biorxiv.org
The COVID-19 pandemic, caused by the novel coronavirus SARS-CoV-2, creates an urgent
need for identifying molecular mechanisms that mediate viral entry, propagation, and tissue …

[HTML][HTML] A spatially resolved atlas of the human lung characterizes a gland-associated immune niche

…, N Richoz, A Ribeiro Orsi, L Mamanova, L Bolt… - Nature Genetics, 2023 - nature.com
Single-cell transcriptomics has allowed unprecedented resolution of cell types/states in the
human lung, but their spatial context is less well defined. To (re)define tissue architecture of …