[HTML][HTML] The International Human Epigenome Consortium: a blueprint for scientific collaboration and discovery
The International Human Epigenome Consortium (IHEC) coordinates the generation of a
catalog of high-resolution reference epigenomes of major primary human cell types. The …
catalog of high-resolution reference epigenomes of major primary human cell types. The …
[HTML][HTML] High-resolution TADs reveal DNA sequences underlying genome organization in flies
Despite an abundance of new studies about topologically associating domains (TADs), the
role of genetic information in TAD formation is still not fully understood. Here we use our …
role of genetic information in TAD formation is still not fully understood. Here we use our …
[PDF][PDF] The glucose transporter GLUT3 controls T helper 17 cell responses through glycolytic-epigenetic reprogramming
Metabolic reprogramming is a hallmark of activated T cells. The switch from oxidative
phosphorylation to aerobic glycolysis provides energy and intermediary metabolites for the …
phosphorylation to aerobic glycolysis provides energy and intermediary metabolites for the …
[PDF][PDF] Epigenomic profiling of human CD4+ T cells supports a linear differentiation model and highlights molecular regulators of memory development
…, L Arrigoni, AD Amirabad, FB Ardakani, L Feuerbach… - Immunity, 2016 - cell.com
The impact of epigenetics on the differentiation of memory T (Tmem) cells is poorly defined.
We generated deep epigenomes comprising genome-wide profiles of DNA methylation, …
We generated deep epigenomes comprising genome-wide profiles of DNA methylation, …
[PDF][PDF] The polycomb-dependent epigenome controls β cell dysfunction, dedifferentiation, and diabetes
To date, it remains largely unclear to what extent chromatin machinery contributes to the
susceptibility and progression of complex diseases. Here, we combine deep epigenome …
susceptibility and progression of complex diseases. Here, we combine deep epigenome …
Standardizing chromatin research: a simple and universal method for ChIP-seq
L Arrigoni, AS Richter, E Betancourt… - Nucleic acids …, 2016 - academic.oup.com
Chromatin immunoprecipitation followed by next generation sequencing (ChIP-seq) is a key
technique in chromatin research. Although heavily applied, existing ChIP-seq protocols are …
technique in chromatin research. Although heavily applied, existing ChIP-seq protocols are …
[HTML][HTML] Epigenetic dynamics of monocyte-to-macrophage differentiation
…, AS Richter, T Manke, U Bönisch, L Arrigoni… - Epigenetics & …, 2016 - Springer
Background Monocyte-to-macrophage differentiation involves major biochemical and structural
changes. In order to elucidate the role of gene regulatory changes during this process, …
changes. In order to elucidate the role of gene regulatory changes during this process, …
Prognostic impact of the updated 2018 HFA‐ESC definition of advanced heart failure: results from the HELP‐HF registry
…, F Loiacono, C Tedino, L Arrigoni… - European Journal of …, 2022 - Wiley Online Library
Aims The Heart Failure Association of the European Society of Cardiology (HFA‐ESC)
proposed a definition of advanced heart failure (HF) that has not been validated, yet. We …
proposed a definition of advanced heart failure (HF) that has not been validated, yet. We …
[HTML][HTML] A comprehensive analysis of 195 DNA methylomes reveals shared and cell-specific features of partially methylated domains
Background Partially methylated domains are extended regions in the genome exhibiting a
reduced average DNA methylation level. They cover gene-poor and transcriptionally inactive …
reduced average DNA methylation level. They cover gene-poor and transcriptionally inactive …
[PDF][PDF] Lsd1 ablation triggers metabolic reprogramming of brown adipose tissue
…, D Willmann, K Petroll, N Messaddeq, L Arrigoni… - Cell reports, 2016 - cell.com
Previous work indicated that lysine-specific demethylase 1 (Lsd1) can positively regulate the
oxidative and thermogenic capacities of white and beige adipocytes. Here we investigate …
oxidative and thermogenic capacities of white and beige adipocytes. Here we investigate …