User profiles for L.-F. Nothias
Louis-Félix NothiasChaire de Professeur Junior CNRS - Université Cote d'Azur Verified email at cnrs.fr Cited by 24112 |
Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2
…, AT Naimey, JA Navas-Molina, LF Nothias… - Nature …, 2019 - nature.com
To the Editor—Rapid advances in DNA-sequencing and bioinformatics technologies in the
past two decades have substantially improved understanding of the microbial world. This …
past two decades have substantially improved understanding of the microbial world. This …
Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking
The potential of the diverse chemistries present in natural products (NP) for biotechnology
and medicine remains untapped because NP databases are not searchable with raw data …
and medicine remains untapped because NP databases are not searchable with raw data …
[PDF][PDF] QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science
We present QIIME 2, an opensource microbiome data science platform accessible to users
spanning the microbiome research ecosystem, from scientists and engineers to clinicians …
spanning the microbiome research ecosystem, from scientists and engineers to clinicians …
Feature-based molecular networking in the GNPS analysis environment
Molecular networking has become a key method to visualize and annotate the chemical space
in non-targeted mass spectrometry data. We present feature-based molecular networking …
in non-targeted mass spectrometry data. We present feature-based molecular networking …
Integrative analysis of multimodal mass spectrometry data in MZmine 3
Innovation in mass spectrometry (MS) and the rapidly increasing throughput and sensitivity of
MS instrumentation require adaptations and innovations in data processing tools. Here, we …
MS instrumentation require adaptations and innovations in data processing tools. Here, we …
Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra
Metabolomics using nontargeted tandem mass spectrometry can detect thousands of molecules
in a biological sample. However, structural molecule annotation is limited to structures …
in a biological sample. However, structural molecule annotation is limited to structures …
Reproducible molecular networking of untargeted mass spectrometry data using GNPS
Global Natural Product Social Molecular Networking (GNPS) is an interactive online small
molecule–focused tandem mass spectrometry (MS 2 ) data curation and analysis infrastructure…
molecule–focused tandem mass spectrometry (MS 2 ) data curation and analysis infrastructure…
[HTML][HTML] High-confidence structural annotation of metabolites absent from spectral libraries
MA Hoffmann, LF Nothias, M Ludwig… - Nature …, 2022 - nature.com
Untargeted metabolomics experiments rely on spectral libraries for structure annotation, but,
typically, only a small fraction of spectra can be matched. Previous in silico methods search …
typically, only a small fraction of spectra can be matched. Previous in silico methods search …
[HTML][HTML] Standardized multi-omics of Earth's microbiomes reveals microbial and metabolite diversity
Despite advances in sequencing, lack of standardization makes comparisons across studies
challenging and hampers insights into the structure and function of microbial communities …
challenging and hampers insights into the structure and function of microbial communities …
Bioactivity-based molecular networking for the discovery of drug leads in natural product bioassay-guided fractionation
LF Nothias, M Nothias-Esposito… - Journal of natural …, 2018 - ACS Publications
It is a common problem in natural product therapeutic lead discovery programs that despite
good bioassay results in the initial extract, the active compound(s) may not be isolated during …
good bioassay results in the initial extract, the active compound(s) may not be isolated during …