User profiles for L.M. Zingaretti
Laura ZingarettiBASF Verified email at vegetableseeds.basf.com Cited by 675 |
[HTML][HTML] A guide on deep learning for complex trait genomic prediction
M Pérez-Enciso, LM Zingaretti - Genes, 2019 - mdpi.com
Deep learning (DL) has emerged as a powerful tool to make accurate predictions from complex
data such as image, text, or video. However, its ability to predict phenotypic values from …
data such as image, text, or video. However, its ability to predict phenotypic values from …
[HTML][HTML] Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species
Genomic prediction (GP) is the procedure whereby the genetic merits of untested candidates
are predicted using genome wide marker information. Although numerous examples of GP …
are predicted using genome wide marker information. Although numerous examples of GP …
[HTML][HTML] On the holobiont 'predictome'of immunocompetence in pigs
Background Gut microbial composition plays an important role in numerous traits, including
immune response. Integration of host genomic information with microbiome data is a natural …
immune response. Integration of host genomic information with microbiome data is a natural …
[HTML][HTML] Gut eukaryotic communities in pigs: diversity, composition and host genetics contribution
Background The pig gut microbiome harbors thousands of species of archaea, bacteria,
viruses and eukaryotes such as protists and fungi. However, since the majority of published …
viruses and eukaryotes such as protists and fungi. However, since the majority of published …
A pilot RNA-seq study in 40 pietrain ejaculates to characterize the porcine sperm microbiome
… of their corresponding bacteria was calculated with “lm” function from R [28]. The adjusted
R-squared was provided by the lm function and corresponds to the Wherry’s formula [29]. …
R-squared was provided by the lm function and corresponds to the Wherry’s formula [29]. …
[HTML][HTML] Estimating conformational traits in dairy cattle with DeepAPS: a two-step deep learning automated phenotyping and segmentation approach
J Nye, LM Zingaretti, M Pérez-Enciso - Frontiers in genetics, 2020 - frontiersin.org
Assessing conformation features in an accurate and rapid manner remains a challenge in
the dairy industry. While recent developments in computer vision has greatly improved …
the dairy industry. While recent developments in computer vision has greatly improved …
[HTML][HTML] Automatic fruit morphology phenome and genetic analysis: An application in the octoploid strawberry
LM Zingaretti, A Monfort, M Pérez-Enciso - Plant Phenomics, 2021 - spj.science.org
Automatizing phenotype measurement will decisively contribute to increase plant breeding
efficiency. Among phenotypes, morphological traits are relevant in many fruit breeding …
efficiency. Among phenotypes, morphological traits are relevant in many fruit breeding …
[HTML][HTML] Opportunities and limits of combining microbiome and genome data for complex trait prediction
M Pérez-Enciso, LM Zingaretti… - Genetics Selection …, 2021 - Springer
Background Analysis and prediction of complex traits using microbiome data combined with
host genomic information is a topic of utmost interest. However, numerous questions remain …
host genomic information is a topic of utmost interest. However, numerous questions remain …
[HTML][HTML] Leveraging host-genetics and gut microbiota to determine immunocompetence in pigs
Background The gut microbiota influences host performance playing a relevant role in
homeostasis and function of the immune system. The aim of the present work was to identify …
homeostasis and function of the immune system. The aim of the present work was to identify …
[HTML][HTML] Proteomic profiling and monitoring of training distress and illness in university swimmers during a 25-week competitive season
AM Knab, DC Nieman, LM Zingaretti, AJ Groen… - Frontiers in …, 2020 - frontiersin.org
Purpose To evaluate relationships of proteomics data, athlete-reported illness, athlete training
distress (TDS), and coaches’ ratings of distress and performance over the course of the …
distress (TDS), and coaches’ ratings of distress and performance over the course of the …