User profiles for L.M. Zingaretti

Laura Zingaretti

BASF
Verified email at vegetableseeds.basf.com
Cited by 675

[HTML][HTML] A guide on deep learning for complex trait genomic prediction

M Pérez-Enciso, LM Zingaretti - Genes, 2019 - mdpi.com
Deep learning (DL) has emerged as a powerful tool to make accurate predictions from complex
data such as image, text, or video. However, its ability to predict phenotypic values from …

[HTML][HTML] Exploring deep learning for complex trait genomic prediction in polyploid outcrossing species

LM Zingaretti, SA Gezan, LFV Ferrão… - Frontiers in plant …, 2020 - frontiersin.org
Genomic prediction (GP) is the procedure whereby the genetic merits of untested candidates
are predicted using genome wide marker information. Although numerous examples of GP …

[HTML][HTML] On the holobiont 'predictome'of immunocompetence in pigs

J Calle-García, Y Ramayo-Caldas, LM Zingaretti… - Genetics Selection …, 2023 - Springer
Background Gut microbial composition plays an important role in numerous traits, including
immune response. Integration of host genomic information with microbiome data is a natural …

[HTML][HTML] Gut eukaryotic communities in pigs: diversity, composition and host genetics contribution

Y Ramayo-Caldas, F Prenafeta-Boldú, LM Zingaretti… - Animal Microbiome, 2020 - Springer
Background The pig gut microbiome harbors thousands of species of archaea, bacteria,
viruses and eukaryotes such as protists and fungi. However, since the majority of published …

A pilot RNA-seq study in 40 pietrain ejaculates to characterize the porcine sperm microbiome

M Gòdia, Y Ramayo-Caldas, LM Zingaretti, L Darwich… - Theriogenology, 2020 - Elsevier
… of their corresponding bacteria was calculated with “lm” function from R [28]. The adjusted
R-squared was provided by the lm function and corresponds to the Wherry’s formula [29]. …

[HTML][HTML] Estimating conformational traits in dairy cattle with DeepAPS: a two-step deep learning automated phenotyping and segmentation approach

J Nye, LM Zingaretti, M Pérez-Enciso - Frontiers in genetics, 2020 - frontiersin.org
Assessing conformation features in an accurate and rapid manner remains a challenge in
the dairy industry. While recent developments in computer vision has greatly improved …

[HTML][HTML] Automatic fruit morphology phenome and genetic analysis: An application in the octoploid strawberry

LM Zingaretti, A Monfort, M Pérez-Enciso - Plant Phenomics, 2021 - spj.science.org
Automatizing phenotype measurement will decisively contribute to increase plant breeding
efficiency. Among phenotypes, morphological traits are relevant in many fruit breeding …

[HTML][HTML] Opportunities and limits of combining microbiome and genome data for complex trait prediction

M Pérez-Enciso, LM Zingaretti… - Genetics Selection …, 2021 - Springer
Background Analysis and prediction of complex traits using microbiome data combined with
host genomic information is a topic of utmost interest. However, numerous questions remain …

[HTML][HTML] Leveraging host-genetics and gut microbiota to determine immunocompetence in pigs

Y Ramayo-Caldas, LM Zingaretti, D Pérez-Pascual… - Animal Microbiome, 2021 - Springer
Background The gut microbiota influences host performance playing a relevant role in
homeostasis and function of the immune system. The aim of the present work was to identify …

[HTML][HTML] Proteomic profiling and monitoring of training distress and illness in university swimmers during a 25-week competitive season

AM Knab, DC Nieman, LM Zingaretti, AJ Groen… - Frontiers in …, 2020 - frontiersin.org
Purpose To evaluate relationships of proteomics data, athlete-reported illness, athlete training
distress (TDS), and coaches’ ratings of distress and performance over the course of the …