Diverse hydrogen production and consumption pathways influence methane production in ruminants

C Greening, R Geier, C Wang, LC Woods… - The ISME …, 2019 - academic.oup.com
Farmed ruminants are the largest source of anthropogenic methane emissions globally. The
methanogenic archaea responsible for these emissions use molecular hydrogen (H 2 ), …

Horizontal gene transfer potentiates adaptation by reducing selective constraints on the spread of genetic variation

LC Woods, RJ Gorrell, F Taylor… - Proceedings of the …, 2020 - National Acad Sciences
Horizontal gene transfer (HGT) confers the rapid acquisition of novel traits and is pervasive
throughout microbial evolution. Despite the central role of HGT, the evolutionary forces that …

Bacteriophages evolve enhanced persistence to a mucosal surface

…, R Patwa, LC Woods, C Devendran… - Proceedings of the …, 2022 - National Acad Sciences
The majority of viruses within the gut are obligate bacterial viruses known as bacteriophages
(phages). Their bacteriotropism underscores the study of phage ecology in the gut, where …

Species interactions constrain adaptation and preserve ecological stability in an experimental microbial community

JN Barber, LC Nicholson, LC Woods, LM Judd… - The ISME …, 2022 - academic.oup.com
Species loss within a microbial community can increase resource availability and spur
adaptive evolution. Environmental shifts that cause species loss or fluctuations in community …

Recombination resolves the cost of horizontal gene transfer in experimental populations of Helicobacter pylori

ANT Nguyen, LC Woods, R Gorrell… - Proceedings of the …, 2022 - National Acad Sciences
Horizontal gene transfer (HGT) is important for microbial evolution, yet we know little about
the fitness effects and dynamics of horizontally transferred genetic variants. In this study, we …

Host diversity slows bacteriophage adaptation by selecting generalists over specialists

DG Sant, LC Woods, JJ Barr… - Nature Ecology & Evolution, 2021 - nature.com
Most viruses can infect multiple hosts, yet the selective mechanisms that maintain multi-host
generalists over single-host specialists remain an open question. Here we propagate …

The evolution of coexistence from competition in experimental co-cultures of Escherichia coli and Saccharomyces cerevisiae

JN Barber, AL Sezmis, LC Woods… - The ISME …, 2021 - academic.oup.com
Microbial communities are comprised of many species that coexist on small spatial scales.
This is difficult to explain because many interspecies interactions are competitive, and …

Sex alters molecular evolution in diploid experimental populations of S. cerevisiae

JY Leu, SL Chang, JC Chao, LC Woods… - Nature Ecology & …, 2020 - nature.com
Sex is common among eukaryotes, but entails considerable costs. The selective conditions
that drive the evolutionary maintenance of sexual reproduction remain an open question. …

The (in) complete organelle genome: exploring the use and nonuse of available technologies for characterizing mitochondrial and plastid chromosomes

M Sanitá Lima, LC Woods, MW Cartwright, DR Smith - 2016 - Wiley Online Library
Not long ago, scientists paid dearly in time, money and skill for every nucleotide that they
sequenced. Today, DNA sequencing technologies epitomize the slogan ‘faster, easier, …

Horizontal Gene Transfer, Fitness Costs and Mobility Shape the Spread of Antibiotic Resistance Genes into Experimental Populations of Acinetobacter Baylyi

AL Sezmis, LC Woods, AY Peleg… - Molecular Biology and …, 2023 - academic.oup.com
Horizontal gene transfer (HGT) is important for microbial evolution, but how evolutionary
forces shape the frequencies of horizontally transferred genetic variants in the absence of …