User profiles for Laurence Ettwiller

laurence ettwiller, Ph.D

New England Biolabs, INC
Verified email at neb.com
Cited by 6569

Functional and topological characteristics of mammalian regulatory domains

…, S Ruf, S Nassari, W Schwarzer, L Ettwiller… - Genome …, 2014 - genome.cshlp.org
Long-range regulatory interactions play an important role in shaping gene-expression
programs. However, the genomic features that organize these activities are still poorly …

A novel function of the proneural factor Ascl1 in progenitor proliferation identified by genome-wide characterization of its targets

…, C Hunt, D Dolle, A Bithell, L Ettwiller… - Genes & …, 2011 - genesdev.cshlp.org
Proneural genes such as Ascl1 are known to promote cell cycle exit and neuronal differentiation
when expressed in neural progenitor cells. The mechanisms by which proneural genes …

DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification

L Chen, P Liu, TC Evans Jr, LM Ettwiller - Science, 2017 - science.org
Mutations in somatic cells generate a heterogeneous genomic population and may result in
serious medical conditions. Although cancer is typically associated with somatic variations, …

Epigenomic enhancer annotation reveals a key role for NFIX in neural stem cell quiescence

…, S Hadjur, J Wittbrodt, L Ettwiller… - Genes & …, 2013 - genesdev.cshlp.org
The majority of neural stem cells (NSCs) in the adult brain are quiescent, and this fraction
increases with aging. Although signaling pathways that promote NSC quiescence have been …

[PDF][PDF] Ascl1 coordinately regulates gene expression and the chromatin landscape during neurogenesis

…, A Bithell, S Gillotin, DLC van den Berg, L Ettwiller… - Cell reports, 2015 - cell.com
The proneural transcription factor Ascl1 coordinates gene expression in both proliferating
and differentiating progenitors along the neuronal lineage. Here, we used a cellular model of …

Comparative genomics: genome-wide analysis in metazoan eukaryotes

A Ureta-Vidal, L Ettwiller, E Birney - Nature Reviews Genetics, 2003 - nature.com
The increasing number of complete and nearly complete metazoan genome sequences
provides a significant amount of material for large-scale comparative genomic analysis. Finding …

Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor

…, O Symmons, VV Uslu, D Dolle, C Hot, L Ettwiller… - Nature …, 2011 - nature.com
We present here a Sleeping Beauty–based transposition system that offers a simple and
efficient way to investigate the regulatory architecture of mammalian chromosomes in vivo. With …

[HTML][HTML] A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut …

L Ettwiller, J Buswell, E Yigit, I Schildkraut - BMC genomics, 2016 - Springer
Background The initiating nucleotide found at the 5’ end of primary transcripts has a distinctive
triphosphorylated end that distinguishes these transcripts from all other RNA species. …

[HTML][HTML] The light responsive transcriptome of the zebrafish: function and regulation

…, O Armant, D Dolle, K Lahiri, D Vallone, L Ettwiller… - PloS one, 2011 - journals.plos.org
Most organisms possess circadian clocks that are able to anticipate the day/night cycle and
are reset or “entrained” by the ambient light. In the zebrafish, many organs and even cultured …

Nondestructive enzymatic deamination enables single-molecule long-read amplicon sequencing for the determination of 5-methylcytosine and 5 …

…, S Pradhan, TB Davis, TC Evans, LM Ettwiller - Genome …, 2021 - genome.cshlp.org
The predominant methodology for DNA methylation analysis relies on the chemical deamination
by sodium bisulfite of unmodified cytosine to uracil to permit the differential readout of …