User profiles for Leif Väremo

Leif Väremo Wigge

Discovery Sciences, Data Sciences & Quantitative Biology, AstraZeneca
Verified email at astrazeneca.com
Cited by 1637

Enriching the gene set analysis of genome-wide data by incorporating directionality of gene expression and combining statistical hypotheses and methods

L Väremo, J Nielsen, I Nookaew - Nucleic acids research, 2013 - academic.oup.com
Gene set analysis (GSA) is used to elucidate genome-wide data, in particular transcriptome
data. A multitude of methods have been proposed for this step of the analysis, and many of …

[PDF][PDF] Transcriptional convergence of oligodendrocyte lineage progenitors during development

…, DP Vanichkina, EM Floriddia, H Munguba, L Väremo… - Developmental cell, 2018 - cell.com
Pdgfra+ oligodendrocyte precursor cells (OPCs) arise in distinct specification waves during
embryogenesis in the central nervous system (CNS). It is unclear whether there is a …

[HTML][HTML] Succinate dehydrogenase inhibition leads to epithelial-mesenchymal transition and reprogrammed carbon metabolism

PJP Aspuria, SY Lunt, L Väremo, L Vergnes… - Cancer & …, 2014 - Springer
Background Succinate dehydrogenase (SDH) is a mitochondrial metabolic enzyme complex
involved in both the electron transport chain and the citric acid cycle. SDH mutations …

[PDF][PDF] Proteome-and transcriptome-driven reconstruction of the human myocyte metabolic network and its use for identification of markers for diabetes

L Väremo, C Scheele, C Broholm, A Mardinoglu… - Cell reports, 2015 - cell.com
Skeletal myocytes are metabolically active and susceptible to insulin resistance and are
thus implicated in type 2 diabetes (T2D). This complex disease involves systemic metabolic …

[HTML][HTML] The human cardiac and skeletal muscle proteomes defined by transcriptomics and antibody-based profiling

…, M Huss, C Kampf, H Choi, DA Liem, P Ping, L Väremo… - BMC genomics, 2015 - Springer
Background To understand cardiac and skeletal muscle function, it is important to define and
explore their molecular constituents and also to identify similarities and differences in the …

[HTML][HTML] Novel insights into obesity and diabetes through genome-scale metabolic modeling

L Väremo, I Nookaew, J Nielsen - Frontiers in physiology, 2013 - frontiersin.org
The growing prevalence of metabolic diseases, such as obesity and diabetes, are putting a
high strain on global healthcare systems as well as increasing the demand for efficient …

[HTML][HTML] Type 2 diabetes and obesity induce similar transcriptional reprogramming in human myocytes

L Väremo, TI Henriksen, C Scheele, C Broholm… - Genome medicine, 2017 - Springer
Background Skeletal muscle is one of the primary tissues involved in the development of
type 2 diabetes (T2D). The close association between obesity and T2D makes it difficult to …

BioMet Toolbox 2.0: genome-wide analysis of metabolism and omics data

…, A Nilsson, L Väremo… - Nucleic acids …, 2014 - academic.oup.com
Abstract Analysis of large data sets using computational and mathematical tools have become
a central part of biological sciences. Large amounts of data are being generated each …

Metabolome dynamics of diapause in the butterfly Pieris napi: distinguishing maintenance, termination and post-diapause phases

…, P Šimek, S Nylin, R Agren, L Väremo… - Journal of …, 2018 - journals.biologists.com
Diapause is a deep resting stage facilitating temporal avoidance of unfavourable environmental
conditions, and is used by many insects to adapt their life cycle to seasonal variation. …

[HTML][HTML] Six tissue transcriptomics reveals specific immune suppression in spleen by dietary polyunsaturated fatty acids

SL Svahn, L Väremo, BG Gabrielsson, E Peris… - PLoS …, 2016 - journals.plos.org
Dietary polyunsaturated fatty acids (PUFA) are suggested to modulate immune function, but
the effects of dietary fatty acids composition on gene expression patterns in immune organs …