User profiles for Lincoln Stein

Lincoln Stein

Director of Informatics and Biocomputing, Ontario Institute for Cancer Research
Verified email at oicr.on.ca
Cited by 112046

Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome

…, E Winchester, J Spencer, L Kruglyak, L Stein… - Science, 1998 - science.org
Single-nucleotide polymorphisms (SNPs) are the most frequent type of variation in the human
genome, and they provide powerful tools for a variety of medical genetic studies. In a large-…

The reactome pathway knowledgebase

…, T Varusai, J Weiser, G Wu, L Stein… - Nucleic acids …, 2020 - academic.oup.com
The Reactome Knowledgebase ( https://reactome.org ) provides molecular details of signal
transduction, transport, DNA replication, metabolism and other cellular processes as an …

Reactome: a knowledgebase of biological pathways

…, L Matthews, S Lewis, E Birney, L Stein - Nucleic acids …, 2005 - academic.oup.com
Reactome, located at http://www.reactome.org is a curated, peer-reviewed resource of
human biological processes. Given the genetic makeup of an organism, the complete set of …

JBrowse: a next-generation genome browser

ME Skinner, AV Uzilov, LD Stein, CJ Mungall… - Genome …, 2009 - genome.cshlp.org
We describe an open source, portable, JavaScript-based genome browser, JBrowse, that can
be used to navigate genome annotations over the web. JBrowse helps preserve the user's …

[HTML][HTML] JBrowse: a dynamic web platform for genome visualization and analysis

…, G Helt, DM Goodstein, CG Elsik, SE Lewis, L Stein… - Genome biology, 2016 - Springer
Background JBrowse is a fast and full-featured genome browser built with JavaScript and
HTML5. It is easily embedded into websites or apps but can also be served as a standalone …

The reactome pathway knowledgebase

…, T Varusai, G Viteri, J Weiser, G Wu, L Stein… - Nucleic acids …, 2018 - academic.oup.com
The Reactome Knowledgebase ( https://reactome.org ) provides molecular details of signal
transduction, transport, DNA replication, metabolism, and other cellular processes as an …

Twelve type 2 diabetes susceptibility loci identified through large-scale association analysis

…, PP Pramstaller, I Rudan, E Sijbrands, LD Stein… - Nature …, 2010 - nature.com
By combining genome-wide association data from 8,130 individuals with type 2 diabetes (T2D)
and 38,987 controls of European descent and following up previously unidentified meta-…

The Bioperl toolkit: Perl modules for the life sciences

…, MR Pocock, P Schattner, M Senger, LD Stein… - Genome …, 2002 - genome.cshlp.org
The Bioperl project is an international open-source collaboration of biologists, bioinformaticians,
and computer scientists that has evolved over the past 7 yr into the most comprehensive …

The reactome pathway knowledgebase 2022

…, E Demir, C Sander, R Haw, G Wu, L Stein… - Nucleic acids …, 2022 - academic.oup.com
The Reactome Knowledgebase ( https://reactome.org ), an Elixir core resource, provides
manually curated molecular details across a broad range of physiological and pathological …

Development and Mapping of 2240 New SSR Markers for Rice (Oryza sativa L.)

…, D Schneider, S Cartinhour, D Ware, L Stein - DNA …, 2002 - academic.oup.com
A total of 2414 new di-, tri- and tetra-nucleotide non-redundant SSR primer pairs, representing
2240 unique marker loci, have been developed and experimentally validated for rice (…