Extremely high genetic diversity in a single tumor points to prevalence of non-Darwinian cell evolution
…, L Dong, L Cao, Y Tao, L Hao… - Proceedings of the …, 2015 - National Acad Sciences
The prevailing view that the evolution of cells in a tumor is driven by Darwinian selection
has never been rigorously tested. Because selection greatly affects the level of intratumor …
has never been rigorously tested. Because selection greatly affects the level of intratumor …
Identification of functional cooperative mutations of SETD2 in human acute leukemia
Acute leukemia characterized by chromosomal rearrangements requires additional molecular
disruptions to develop into full-blown malignancy 1 , 2 , yet the cooperative mechanisms …
disruptions to develop into full-blown malignancy 1 , 2 , yet the cooperative mechanisms …
Rapid growth of a hepatocellular carcinoma and the driving mutations revealed by cell-population genetic analysis of whole-genome data
We present the analysis of the evolution of tumors in a case of hepatocellular carcinoma. This
case is particularly informative about cancer growth dynamics and the underlying driving …
case is particularly informative about cancer growth dynamics and the underlying driving …
[HTML][HTML] Integrated genomic analysis identifies deregulated JAK/STAT-MYC-biosynthesis axis in aggressive NK-cell leukemia
Aggressive NK-cell leukemia (ANKL) is a rare form of NK cell neoplasm that is more prevalent
among people from Asia and Central and South America. Patients usually die within days …
among people from Asia and Central and South America. Patients usually die within days …
[HTML][HTML] Quartet DNA reference materials and datasets for comprehensively evaluating germline variant calling performance
Background Genomic DNA reference materials are widely recognized as essential for ensuring
data quality in omics research. However, relying solely on reference datasets to evaluate …
data quality in omics research. However, relying solely on reference datasets to evaluate …
[HTML][HTML] Long non-coding RNA C5orf66-AS1 is downregulated in pituitary null cell adenomas and is associated with their invasiveness
…, W Xie, Z Wang, H Gao, L Cao, L Hao… - Oncology …, 2017 - spandidos-publications.com
Pituitary null cell adenoma is a challenging clinical condition, and its pathogenesis remains
to be elucidated. We performed this study to determine the roles of C5orf66-AS1, NORAD, …
to be elucidated. We performed this study to determine the roles of C5orf66-AS1, NORAD, …
GVC: An ultra-fast and all-round genome variant caller
Z Zhang, L Yin, L Hao, L Cao, C Liu, M Chen, C Li, Z Xu… - bioRxiv, 2017 - biorxiv.org
Genome variant detection is a challenge task in cancer genome analysis. Current software
for variant detection is very time-consuming and in the same time not accurate enough to …
for variant detection is very time-consuming and in the same time not accurate enough to …
Primary halo characteristics of the north ore zone in the Huachanggou gold deposit, Lueyang County, Shaanxi Province
…, W Li-xin, YU Kang-wei, W Ling-tong - Geology in …, 2012 - geochina.cgs.gov.cn
Abstract: The Huachanggou gold deposit of Shaanxi Province occurs in the submarine basic
volcanic effusive spillite. Based on field geological work in the Huachanggou gold deposit, …
volcanic effusive spillite. Based on field geological work in the Huachanggou gold deposit, …
Whole-exome sequencing of neuroendocrine neoplasm of the liver reveals recurrent mutations in components of RTK-RAS pathways
L Chen, Y Ji, J Zhao, L Hao, Y Li, X Zhang, H Sun… - Cancer Research, 2019 - AACR
Aims: Primary hepatic neuroendocrine neoplasms (phNENs) is a rare and poorly
understood type of primary liver cancer. We aimed to perform a comprehensive molecular …
understood type of primary liver cancer. We aimed to perform a comprehensive molecular …
[PDF][PDF] GVC: A superfast and universal genomic variant caller
Z Zhang, L Yin, L Cao, C Liu, L Hao, S Ling - bioRxiv, 2017 - scholar.archive.org
Germline and somatic variant detection from human and cancer whole-genome sequencing
data is a challenge task for genome-wide association study and cancer genomics in …
data is a challenge task for genome-wide association study and cancer genomics in …