Uncultured Nitrospina-like species are major nitrite oxidizing bacteria in oxygen minimum zones

X Sun, LFM Kop, MCY Lau, J Frank… - The ISME …, 2019 - academic.oup.com
Oxygen minimum zones (OMZs) are marine regions where O 2 is undetectable at intermediate
depths. Within OMZs, the oxygen-depleted zone (ODZ) induces anaerobic microbial …

[HTML][HTML] Defining culture conditions for the hidden nitrite-oxidizing bacterium Nitrolancea

…, M Spohn, D Indenbirken, LFM Kop… - Frontiers in …, 2020 - frontiersin.org
Nitrification is a key process for N-removal in engineered and natural environments, but
recent findings of novel nitrifying microorganisms with surprising features revealed that our …

Universal activity-based labeling method for ammonia-and alkane-oxidizing bacteria

…, GJ Smith, J Frank, RJ Mesman, LFM Kop… - The ISME …, 2022 - academic.oup.com
The advance of metagenomics in combination with intricate cultivation approaches has
facilitated the discovery of novel ammonia-, methane-, and other short-chain alkane-oxidizing …

Salmonella-mediated inflammation eliminates competitors for fructose-asparagine in the gut

J Wu, A Sabag-Daigle, MA Borton, LFM Kop… - Infection and …, 2018 - Am Soc Microbiol
Salmonella enterica elicits intestinal inflammation to gain access to nutrients. One of these
nutrients is fructose-asparagine (F-Asn). The availability of F-Asn to Salmonella during …

Metabolic and phylogenetic diversity in the phylum Nitrospinota revealed by comparative genome analyses

LFM Kop, H Koch, MSM Jetten, H Daims… - ISME …, 2024 - academic.oup.com
Linnea FM Kop and Hanna Koch analyzed and interpreted the data. Linnea FM Kop, Hanna
Koch, and Sebastian Lücker wrote the manuscript with input from all authors. All authors …

Complete Genome Sequence of Nitrospina watsonii 347, Isolated from the Black Sea

LFM Kop, H Koch, E Spieck, T van Alen… - Microbiology …, 2023 - Am Soc Microbiol
Here, we present the complete genome sequence of Nitrospina watsonii 347, a nitrite-oxidizing
bacterium isolated from the Black Sea at a depth of 100 m. The genome has a length of …

[HTML][HTML] Exposing new taxonomic variation with inflammation—a murine model-specific genome database for gut microbiome researchers

…, K Kokkinias, RM Flynn, RA Daly, LFM Kop… - Microbiome, 2023 - Springer
Background The murine CBA/J mouse model widely supports immunology and enteric
pathogen research. This model has illuminated Salmonella interactions with the gut microbiome …

An activity-based labelling method for the detection of ammonia and methane-oxidizing bacteria

D Sakoula, GJ Smith, J Frank, RJ Mesman, LFM Kop… - BioRxiv, 2021 - biorxiv.org
The advance of metagenomics in combination with intricate cultivation approaches has
facilitated the discovery of novel ammonia- and methane-oxidizing microorganisms, indicating …

Association between vitamin D, frailty, and progression of frailty in community-dwelling older women

D Buchebner, P Bartosch, L Malmgren… - The Journal of …, 2019 - academic.oup.com
Context Vitamin D (25OHD) is involved in many physiological functions that decline with age,
contributing to frailty and increased risk for negative health outcomes. Whether 25OHD is a …

Portfolio Optimization Problems with Transaction Costs

S Gustavsson, L Gyllberg - 2023 - diva-portal.org
Portfolio theory is a cornerstone of modern finance, and it is based on the idea that an investor
can reduce risk by diversifying their investments across various assets. In practice, Harry …