Neoantigen vaccine generates intratumoral T cell responses in phase Ib glioblastoma trial
…, S Charbonneau, K Pelton, JB Iorgulescu, L Elagina… - Nature, 2019 - nature.com
Neoantigens, which are derived from tumour-specific protein-coding mutations, are exempt
from central tolerance, can generate robust immune responses 1 , 2 and can function as …
from central tolerance, can generate robust immune responses 1 , 2 and can function as …
Liquid versus tissue biopsy for detecting acquired resistance and tumor heterogeneity in gastrointestinal cancers
During cancer therapy, tumor heterogeneity can drive the evolution of multiple tumor
subclones harboring unique resistance mechanisms in an individual patient 1 , 2 – 3 . Previous …
subclones harboring unique resistance mechanisms in an individual patient 1 , 2 – 3 . Previous …
Personal neoantigen vaccines induce persistent memory T cell responses and epitope spreading in patients with melanoma
Personal neoantigen vaccines have been envisioned as an effective approach to induce,
amplify and diversify antitumor T cell responses. To define the long-term effects of such a …
amplify and diversify antitumor T cell responses. To define the long-term effects of such a …
TAS-120 overcomes resistance to ATP-competitive FGFR inhibitors in patients with FGFR2 fusion–positive intrahepatic cholangiocarcinoma
…, JK Lennerz, S Raghavan, I Leschiner, L Elagina… - Cancer discovery, 2019 - AACR
ATP-competitive FGFR inhibitors (BGJ398, Debio 1347) show efficacy in FGFR2 -altered
ICC; however, acquired FGFR2 kinase domain mutations cause drug resistance and tumor …
ICC; however, acquired FGFR2 kinase domain mutations cause drug resistance and tumor …
Evolutionary history of transformation from chronic lymphocytic leukemia to Richter syndrome
…, D Livitz, C Schneider, N Ruthen, L Elagina… - Nature medicine, 2023 - nature.com
Richter syndrome (RS) arising from chronic lymphocytic leukemia (CLL) exemplifies an
aggressive malignancy that develops from an indolent neoplasm. To decipher the genetics …
aggressive malignancy that develops from an indolent neoplasm. To decipher the genetics …
[HTML][HTML] Genomic profiling of smoldering multiple myeloma identifies patients at a high risk of disease progression
…, SJ Chavda, C Boehner, L Elagina… - Journal of Clinical …, 2020 - ncbi.nlm.nih.gov
PURPOSE Smoldering multiple myeloma (SMM) is a precursor condition of multiple myeloma
(MM) with a 10% annual risk of progression. Various prognostic models exist for risk …
(MM) with a 10% annual risk of progression. Various prognostic models exist for risk …
Comprehensive analysis of tumour initiation, spatial and temporal progression under multiple lines of treatment
…, A Martinez, E Mroz, JJ Lin, C Stewart, J Kim, L Elagina… - biorxiv, 2018 - biorxiv.org
Driver mutations alter cells from normal to cancer through several evolutionary epochs:
premalignancy, early malignancy, subclonal diversification, metastasis and resistance to therapy. …
premalignancy, early malignancy, subclonal diversification, metastasis and resistance to therapy. …
[PDF][PDF] Combined tumor and immune signals from genomes or transcriptomes predict outcomes of checkpoint inhibition in melanoma
…, DT Frederick, T Sharova, I Leshchiner, L Elagina… - Cell Reports …, 2022 - cell.com
Immune checkpoint blockade (CPB) improves melanoma outcomes, but many patients still
do not respond. Tumor mutational burden (TMB) and tumor-infiltrating T cells are associated …
do not respond. Tumor mutational burden (TMB) and tumor-infiltrating T cells are associated …
Distinct evolutionary paths in chronic lymphocytic leukemia during resistance to the graft-versus-leukemia effect
Leukemic relapse remains a major barrier to successful allogeneic hematopoietic stem cell
transplantation (allo-HSCT) for aggressive hematologic malignancies. The basis for relapse …
transplantation (allo-HSCT) for aggressive hematologic malignancies. The basis for relapse …
Differentially private rank aggregation
Given a collection of rankings of a set of items, rank aggregation seeks to compute a ranking
that can serve as a single best representative of the collection. Rank aggregation is a well-…
that can serve as a single best representative of the collection. Rank aggregation is a well-…