User profiles for Loeiz Maillet

Loeiz Maillet

Bioinformaticien, INRAE - IGEPP
Verified email at inrae.fr
Cited by 121

Long-read assembly of the Brassica napus reference genome Darmor-bzh

…, JF de Carvalho, A Lemainque, L Maillet… - …, 2020 - academic.oup.com
Background The combination of long reads and long-range information to produce genome
assemblies is now accepted as a common standard. This strategy not only allows access to …

Epigenomic and structural events preclude recombination in Brassica napus

…, M Gilet, M Lodé‐Taburel, L Maillet… - New …, 2022 - Wiley Online Library
Meiotic recombination is a major evolutionary process generating genetic diversity at each
generation in sexual organisms. However, this process is highly regulated, with the majority …

[HTML][HTML] Genome Size Variation and Comparative Genomics Reveal Intraspecific Diversity in Brassica rapa

J Boutte, L Maillet, T Chaussepied, S Letort… - Frontiers in plant …, 2020 - frontiersin.org
Traditionally, reference genomes in crop species rely on the assembly of one accession, thus
occulting most of intraspecific diversity. However, rearrangements, gene duplications, and …

[HTML][HTML] Sequencing and Chromosome-Scale Assembly of Plant Genomes, Brassica rapa as a Use Case

…, C Falentin, K Labadie, F Boideau, G Deniot, L Maillet… - Biology, 2021 - mdpi.com
Simple Summary Reconstructing plant genomes is a difficult task due to their often large
sizes, unusual ploidy, and large numbers of repeated elements. However, the field of …

[HTML][HTML] A Modified Meiotic Recombination in Brassica napus Largely Improves Its Breeding Efficiency

…, A Pelé, C Tanguy, G Trotoux, F Eber, L Maillet… - Biology, 2021 - mdpi.com
Simple Summary The selection of varieties more resilient to disease and climate change
requires generating new genetic diversity for breeding. The main mechanism for reshuffling …

Why old duplicated genes are not thrown away in (paleo)polyploids? Example from the petC gene in Brassica napus

…, H Archambeau, E Montes, Y Dellero, L Maillet… - Plant Molecular …, 2023 - Springer
Duplication of genes at different time period, through recurrent and frequent polyploidization
events, have played a major role in plant evolution, adaptation and diversification. …

Genetic diversity of the carp oedema virus in France

M Baud, L Pallandre, F Almeras, L Maillet… - Journal of Fish …, 2021 - Wiley Online Library
The koi sleepy disease of carp caused by the carp oedema virus (CEV) was observed on
farms and in ponds in France since the 2010s. Samples of CEV collected in France over a …

Plant genetic bases explaining microbiota diversity shed light into a novel holobiont generalist gene theory

L Maillet, M Norest, A Kautsky, A Geraci, E Oddo… - bioRxiv, 2023 - biorxiv.org
Plants as animals are strictly associated with a cortege of microbial communities influencing
their health, fitness and evolution. Therefore, scientists refer to all living organisms as …

Large genomic variants reveal unexplored intraspecific diversity in Brassica rapa genomes

J Boutte, L Maillet, T Chaussepied, S Letort, JM Aury… - bioRxiv, 2020 - biorxiv.org
Traditionally, reference genomes in crop species rely on the assembly of one accession, thus
occulting most of intraspecific diversity. However, rearrangements, gene duplications and …

Playing with the ploidy level enables to switch on and off the strict recombination control even in the vicinity of Brassica centromeres

F Boideau, V Huteau, A Brunet, L Maillet, O Coriton… - bioRxiv, 2024 - biorxiv.org
Meiotic recombination is a key biological process in plant evolution and breeding, as it
generates novel genetic diversity at each generation. However, due to its importance in …