User profiles for M. A. Tsuchida

Mark Tsuchida

University of Wisconsin–Madison
Verified email at wisc.edu
Cited by 2421

[HTML][HTML] Advanced methods of microscope control using μManager software

AD Edelstein, MA Tsuchida, N Amodaj… - Journal of biological …, 2014 - ncbi.nlm.nih.gov
μManager is an open-source, cross-platform desktop application, to control a wide variety of
motorized microscopes, scientific cameras, stages, illuminators, and other microscope …

Myosin II contributes to cell-scale actin network treadmilling through network disassembly

CA Wilson, MA Tsuchida, GM Allen, EL Barnhart… - Nature, 2010 - nature.com
Crawling locomotion of eukaryotic cells is achieved by a process dependent on the actin
cytoskeleton 1 : protrusion of the leading edge requires assembly of a network of actin filaments …

Pycro-Manager: open-source software for customized and reproducible microscope control

…, NM Anthony, W Ouyang, B Li, B Yang, MA Tsuchida… - Nature …, 2021 - nature.com
To the Editor—Cutting-edge innovations in biological microscopy are increasingly blurring
the line between data acquisition and data analysis. Computational microscopy and machine-…

Hydrogen bond dynamics in the active site of photoactive yellow protein

PA Sigala, MA Tsuchida… - Proceedings of the …, 2009 - National Acad Sciences
Hydrogen bonds play major roles in biological structure and function. Nonetheless,
hydrogen-bonded protons are not typically observed by X-ray crystallography, and most structural …

[PDF][PDF] Cell mechanics at the rear act to steer the direction of cell migration

GM Allen, KC Lee, EL Barnhart, MA Tsuchida… - Cell Systems, 2020 - cell.com
… In an attempt to appropriately simulate the trajectories of the majority of keratocytes with
persistent turning and high A(u), we next attempted simulating stochastic variations in the time …

[PDF][PDF] ALS genetics: gains, losses, and implications for future therapies

G Kim, O Gautier, E Tassoni-Tsuchida, XR Ma… - Neuron, 2020 - cell.com
Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disorder caused by the loss
of motor neurons from the brain and spinal cord. The ALS community has made remarkable …

Choosing orientation: influence of cargo geometry and ActA polarization on actin comet tails

…, PAG Soneral, J Zhu, MA Tsuchida… - Molecular biology of …, 2012 - Am Soc Cell Biol
Networks of polymerizing actin filaments can propel intracellular pathogens and drive movement
of artificial particles in reconstituted systems. While biochemical mechanisms activating …

[HTML][HTML] Real-time open-source FLIM analysis

KKD Tan, MA Tsuchida, JV Chacko… - Frontiers in …, 2023 - ncbi.nlm.nih.gov
Fluorescence lifetime imaging microscopy (FLIM) provides valuable quantitative insights into
fluorophores’ chemical microenvironment. Due to long computation times and the lack of …

[HTML][HTML] The current status and future prospects of kagra, the large-scale cryogenic gravitational wave telescope built in the kamioka underground

…, T Tomaru, T Tomura, L Trozzo, TTL Tsang, S Tsuchida… - Galaxies, 2022 - mdpi.com
KAGRA is a gravitational-wave (GW) detector constructed in Japan with two unique key
features: It was constructed underground, and the test-mass mirrors are cooled to cryogenic …

Generation of functional erythrocytes from human embryonic stem cell-derived definitive hematopoiesis

…, H Zhang, Y Zaike, E Tsuchida… - Proceedings of the …, 2008 - National Acad Sciences
A critical issue for clinical utilization of human ES cells (hESCs) is whether they can generate
terminally mature progenies with normal function. We recently developed a method for …