User profiles for M. Kirsche

Miko Kirschbaum

- Verified email at LandcareResearch.co.nz - Cited by 19356

Melanie Kirsche

- Verified email at jhu.edu - Cited by 3367

Temperature and soil organic matter decomposition rates–synthesis of current knowledge and a way forward

RT Conant, MG Ryan, GI Ågren, HE Birge… - Global change …, 2011 - Wiley Online Library
The response of soil organic matter ( OM ) decomposition to increasing temperature is a
critical aspect of ecosystem responses to global change. The impacts of climate warming on …

Guidelines for perioperative care in cardiac surgery: enhanced recovery after surgery society recommendations

…, JH Levy, K Lobdell, N Fletcher, M Kirsch… - JAMA …, 2019 - jamanetwork.com
Enhanced Recovery After Surgery (ERAS) evidence-based protocols for perioperative care
can lead to improvements in clinical outcomes and cost savings. This article aims to present …

Temperature response of parameters of a biochemically based model of photosynthesis. II. A review of experimental data

…, E Dreyer, D Ellsworth, M Forstreuter… - Plant, Cell & …, 2002 - Wiley Online Library
… data set using alternative forms for K m . (d) Response of ratio J max : V cmax to leaf
temperature obtained by fitting a sample data set using alternative forms for K m . Key: Solid line: …

The complete sequence of a human genome

…, M Kirsche, M Kolmogorov, J Korlach, M Kremitzki… - Science, 2022 - science.org
Since its initial release in 2000, the human reference genome has covered only the
euchromatic fraction of the genome, leaving important heterochromatic regions unfinished. …

[PDF][PDF] Major impacts of widespread structural variation on gene expression and crop improvement in tomato

…, AL Caicedo, DM Tieman, H Klee, M Kirsche… - Cell, 2020 - cell.com
M. Kirsche and SA wrote software for SV merging. M. Kramer, SG, and WRM performed
long-read sequencing. MA, XW, MCS, and ZBL wrote the manuscript with input from MB, LP, LZ, …

A complete reference genome improves analysis of human genetic variation

S Aganezov, SM Yan, DC Soto, M Kirsche, S Zarate… - Science, 2022 - science.org
Compared to its predecessors, the Telomere-to-Telomere CHM13 genome adds nearly 200
million base pairs of sequence, corrects thousands of structural errors, and unlocks the most …

[HTML][HTML] Semi-automated assembly of high-quality diploid human reference genomes

…, A Hastie, M Haukness, EB Jaeger, M Jain, M Kirsche… - Nature, 2022 - nature.com
The current human reference genome, GRCh38, represents over 20 years of effort to generate
a high-quality assembly, which has benefitted society 1 , 2 . However, it still has many …

[HTML][HTML] Automated assembly scaffolding using RagTag elevates a new tomato system for high-throughput genome editing

M Alonge, L Lebeigle, M Kirsche, K Jenike, S Ou… - Genome biology, 2022 - Springer
Advancing crop genomics requires efficient genetic systems enabled by high-quality
personalized genome assemblies. Here, we introduce RagTag, a toolset for automating assembly …

Jasmine and Iris: population-scale structural variant comparison and analysis

M Kirsche, G Prabhu, R Sherman, B Ni, A Battle… - Nature …, 2023 - nature.com
The availability of long reads is revolutionizing studies of structural variants (SVs). However,
because SVs vary across individuals and are discovered through imprecise read …

Automated assembly scaffolding elevates a new tomato system for high-throughput genome editing

M Alonge, L Lebeigle, M Kirsche, S Aganezov, X Wang… - BioRxiv, 2021 - biorxiv.org
Advancing crop genomics requires efficient genetic systems enabled by high-quality
personalized genome assemblies. Here, we introduce RagTag, a toolset for automating assembly …