User profiles for M. Pichaud
Matthieu PichaudHead of Data Science and Statistics, Danone Research Verified email at danone.com Cited by 843 |
A structural perspective on protein–protein interactions
Structures of macromolecular complexes are necessary for a mechanistic description of
biochemical and cellular processes. They can be solved by experimental methods, such as X-…
biochemical and cellular processes. They can be solved by experimental methods, such as X-…
Protein complexes: structure prediction challenges for the 21st century
Only a tiny fraction of the many hundreds of known protein complexes are also of known
three-dimensional structure. The experimental difficulties surrounding structure determination of …
three-dimensional structure. The experimental difficulties surrounding structure determination of …
[HTML][HTML] Global branches and local states of the human gut microbiome define associations with environmental and intrinsic factors
The gut microbiome is important for human health, yet modulation requires more insight into
inter-individual variation. Here, we explored latent structures of the human gut microbiome …
inter-individual variation. Here, we explored latent structures of the human gut microbiome …
MSPminer: abundance-based reconstitution of microbial pan-genomes from shotgun metagenomic data
Motivation Analysis toolkits for shotgun metagenomic data achieve strain-level characterization
of complex microbial communities by capturing intra-species gene content variation. Yet, …
of complex microbial communities by capturing intra-species gene content variation. Yet, …
Gut microbial diversity is reduced in smokers with Crohn's disease
…, SWC van Mil, E Achouri, M Pichaud… - Inflammatory bowel …, 2016 - academic.oup.com
Background Smoking has a negative impact on Crohn's disease (CD), but the mechanisms
underlying this association are unclear. We compared the gut microbiota composition of …
underlying this association are unclear. We compared the gut microbiota composition of …
[PDF][PDF] Gut microbiome ADP-ribosyltransferases are widespread phage-encoded fitness factors
…, ER Temple, ZA Costliow, M Pichaud… - Cell host & …, 2021 - cell.com
Bacterial ADP-ribosyltransferases (ADPRTs) have been described as toxins involved in
pathogenesis through the modification of host proteins. Here, we report that ADPRTs are not …
pathogenesis through the modification of host proteins. Here, we report that ADPRTs are not …
[HTML][HTML] Congruent microbiome signatures in fibrosis-prone autoimmune diseases: IgG4-related disease and systemic sclerosis
Background Immunoglobulin G4-related disease (IgG4-RD) and systemic sclerosis (SSc) are
rare autoimmune diseases characterized by the presence of CD4+ cytotoxic T cells in the …
rare autoimmune diseases characterized by the presence of CD4+ cytotoxic T cells in the …
[HTML][HTML] Gut bacterial metabolites modulate endoplasmic reticulum stress
Background The endoplasmic reticulum (ER) is a membranous organelle that maintains
proteostasis and cellular homeostasis, controlling the fine balance between health and disease. …
proteostasis and cellular homeostasis, controlling the fine balance between health and disease. …
[HTML][HTML] Mucosal metabolites fuel the growth and virulence of E. coli linked to Crohn's disease
Elucidating how resident enteric bacteria interact with their hosts to promote health or
inflammation is of central importance to diarrheal and inflammatory bowel diseases across species…
inflammation is of central importance to diarrheal and inflammatory bowel diseases across species…
Status of the Virgo project
…, M Pichot, F Piergiovanni, M Pietka… - … and Quantum Gravity, 2011 - iopscience.iop.org
We describe the present state and future evolution of the Virgo gravitational wave detector,
realized by the Virgo Collaboration at the European Gravitational Observatory, in Cascina …
realized by the Virgo Collaboration at the European Gravitational Observatory, in Cascina …