Dissecting protein function and signaling using protein microarrays

A Wolf-Yadlin, M Sevecka, G MacBeath - Current opinion in chemical …, 2009 - Elsevier
… By treating cells grown in microtiter plates with cell-permeable small molecules, and by
arraying the resulting lysates, Sevecka and MacBeath showed that compounds could be …

Enhanced targeting of the EGFR network with MM-151, an oligoclonal anti-EGFR antibody therapeutic

JD Kearns, R Bukhalid, M Sevecka, G Tan… - Molecular Cancer …, 2015 - AACR
Although EGFR is a validated therapeutic target across multiple cancer indications, the
often modest clinical responses to current anti-EGFR agents suggest the need for improved …

State-based discovery: a multidimensional screen for small-molecule modulators of EGF signaling

M Sevecka, G MacBeath - Nature methods, 2006 - nature.com
As an alternative to conventional, target-oriented drug discovery, we report a strategy that
identifies compounds on the basis of the state that they induce in a signaling network. …

Uncovering quantitative protein interaction networks for mouse PDZ domains using protein microarrays

MA Stiffler, VP Grantcharova, M Sevecka… - Journal of the …, 2006 - ACS Publications
One of the principal challenges in systems biology is to uncover the networks of protein−protein
interactions that underlie most biological processes. To date, experimental efforts …

[HTML][HTML] Predicting ligand-dependent tumors from multi-dimensional signaling features

…, V Paragas, JE Allen, M Sevecka… - NPJ systems biology …, 2017 - nature.com
Targeted therapies have shown significant patient benefit in about 5–10% of solid tumors
that are addicted to a single oncogene. Here, we explore the idea of ligand addiction as a …

Receptor tyrosine kinases fall into distinct classes based on their inferred signaling networks

JP Wagner, A Wolf-Yadlin, M Sevecka, JK Grenier… - Science …, 2013 - science.org
Although many anticancer drugs that target receptor tyrosine kinases (RTKs) provide clinical
benefit, their long-term use is limited by resistance that is often attributed to increased …

Linear combinations of docking affinities explain quantitative differences in RTK signaling

…, A Kaushansky, A Wolf‐Yadlin, M Sevecka… - Molecular systems …, 2009 - embopress.org
Receptor tyrosine kinases (RTKs) process extracellular cues by activating a broad array of
signaling proteins. Paradoxically, they often use the same proteins to elicit diverse and even …

[HTML][HTML] Lysate microarrays enable high-throughput, quantitative investigations of cellular signaling

M Sevecka, A Wolf-Yadlin, G MacBeath - Molecular & Cellular Proteomics, 2011 - ASBMB
Lysate microarrays (reverse-phase protein arrays) hold great promise as a tool for systems-level
investigations of signaling and multiplexed analyses of disease biomarkers. To date, …

A dual array-based approach to assess the abundance and posttranslational modification state of signaling proteins

K Luckert, TS Gujral, M Chan, M Sevecka, TO Joos… - Science …, 2012 - science.org
A system-wide analysis of cell signaling requires detecting and quantifying many different
proteins and their posttranslational modification states in the same cellular sample. Here, we …

In-vitro studies of MM-121/SAR 256212, an anti-ErbB-3 antibody, in combination with erlotinib in EGFR-wild-type NSCLC.

MJ Wainszelbaum, MS Sevecka, O Burenkova… - Cancer Research, 2013 - AACR
MM-121/SAR 256212 is a fully human anti ErbB3/HER3 antibody that blocks ligand-induced
receptor activation. Formation of EGFR/ErbB3 (ErbB1-3) heterodimers has been implicated …