User profiles for M. Topel

Mats Töpel

- Verified email at topel.se - Cited by 2243

Matthew Topel

- Verified email at emory.edu - Cited by 1475

[HTML][HTML] The genome of the seagrass Zostera marina reveals angiosperm adaptation to the sea

…, M Töpel, T Tonon, K Vanneste, M Amirebrahimi… - Nature, 2016 - nature.com
… gene tree, obtained by PhyML 65 , all m K S estimates between the two child clades were
added to the K S distribution with a weight 1/m (where m is the number of K S estimates for a …

Viscoelastic properties of human mesenchymally-derived stem cells and primary osteoblasts, chondrocytes, and adipocytes

EM Darling, M Topel, S Zauscher, TP Vail… - Journal of …, 2008 - Elsevier
The mechanical properties of single cells play important roles in regulating cell-matrix
interactions, potentially influencing the process of mechanotransduction. Recent studies also …

[HTML][HTML] Deep learning suggests that gene expression is encoded in all parts of a co-evolving interacting gene regulatory structure

…, V Siewers, V Verendel, J Nielsen, M Töpel… - Nature …, 2020 - nature.com
Understanding the genetic regulatory code governing gene expression is an important
challenge in molecular biology. However, how individual coding and non-coding regions of the …

[HTML][HTML] Mining metadata from unidentified ITS sequences in GenBank: A case study in Inocybe (Basidiomycota)

M Ryberg, RH Nilsson, E Kristiansson, M Töpel… - BMC Evolutionary …, 2008 - Springer
Background The lack of reference sequences from well-identified mycorrhizal fungi often
poses a challenge to the inference of taxonomic affiliation of sequences from environmental …

Association between oxidative stress and atrial fibrillation

…, M Hammadah, H Mohamed-Kelli, WT O'Neal, M Topel… - Heart rhythm, 2017 - Elsevier
Background Oxidative stress (OS) may be a key mechanism underlying the development of
atrial fibrillation (AF) in experimental studies, but data in humans remain limited. Objective …

SpeciesGeoCoder: Fast categorization of species occurrences for analyses of biodiversity, biogeography, ecology, and evolution

M Töpel, A Zizka, MF Calió, R Scharn… - Systematic …, 2017 - academic.oup.com
… We created two operational units from each polygon, one including occurrences below
1000 m asl (lowlands) and the second including occurrences above 1000 m asl (highlands) …

Allele phasing greatly improves the phylogenetic utility of ultraconserved elements

…, AM Fernandes, U Olsson, M Töpel… - Systematic …, 2019 - academic.oup.com
Advances in high-throughput sequencing techniques now allow relatively easy and
affordable sequencing of large portions of the genome, even for nonmodel organisms. Many …

Ubiquitin-dependent chloroplast-associated protein degradation in plants

Q Ling, W Broad, R Trösch, M Töpel, T Demiral Sert… - Science, 2019 - science.org
… We thank M. Rashbrooke for assistance with initial analyses and rough mapping of sp2; Y. …
We thank M. Rashbrooke for assistance with initial analyses and rough mapping of sp2; Y. …

Association between living in food deserts and cardiovascular risk

…, M Hammadah, H Ahmed, YA Ko, M Topel… - … Quality and Outcomes, 2017 - Am Heart Assoc
Background— Food deserts (FD), neighborhoods defined as low-income areas with low
access to healthy food, are a public health concern. We evaluated the impact of living in FD on …

High‐sensitivity troponin I levels and coronary artery disease severity, progression, and long‐term outcomes

…, A Alkhoder, HM Kelli, M Topel… - Journal of the …, 2018 - Am Heart Assoc
Background The associations between high‐sensitivity troponin I (hsTnI) levels and coronary
artery disease (CAD) severity and progression remain unclear. We investigated whether …