User profiles for M. Vilkhovoy
Michael VilkhovoyCornell University Verified email at cornell.edu Cited by 231 |
[HTML][HTML] The evolution of cell free biomanufacturing
… On the other hand, to circumvent computationally expensive parameter estimation, Vilkhovoy
and coworkers [154] developed an experimentally-validated constraint-based model of …
and coworkers [154] developed an experimentally-validated constraint-based model of …
Engineering orthogonal human O-linked glycoprotein biosynthesis in bacteria
A major objective of synthetic glycobiology is to re-engineer existing cellular glycosylation
pathways from the top down or construct non-natural ones from the bottom up for new and …
pathways from the top down or construct non-natural ones from the bottom up for new and …
Sequence Specific Modeling of E. coli Cell-Free Protein Synthesis
M Vilkhovoy, N Horvath, CH Shih… - ACS synthetic …, 2018 - ACS Publications
Cell-free protein synthesis (CFPS) is a widely used research tool in systems and synthetic
biology. However, if CFPS is to become a mainstream technology for applications such as …
biology. However, if CFPS is to become a mainstream technology for applications such as …
[HTML][HTML] Toward a genome scale sequence specific dynamic model of cell-free protein synthesis in Escherichia coli
In this study, we developed a dynamic mathematical model of E. coli cell-free protein synthesis
(CFPS). Model parameters were estimated from a dataset consisting of glucose, organic …
(CFPS). Model parameters were estimated from a dataset consisting of glucose, organic …
Convergent approaches to delineate the metabolic regulation of tumor invasion by hyaluronic acid biosynthesis
Metastasis is the leading cause of breast cancer‐related deaths and is often driven by
invasion and cancer‐stem like cells (CSCs). Both the CSC phenotype and invasion are …
invasion and cancer‐stem like cells (CSCs). Both the CSC phenotype and invasion are …
Absolute quantification of cell-free protein synthesis metabolism by reversed-phase liquid chromatography-mass spectrometry
Cell-free protein synthesis (CFPS) is an emerging technology in systems and synthetic
biology for the in vitro production of proteins. However, if CFPS is going to move beyond the …
biology for the in vitro production of proteins. However, if CFPS is going to move beyond the …
[HTML][HTML] JuPOETs: a constrained multiobjective optimization approach to estimate biochemical model ensembles in the Julia programming language
Background Ensemble modeling is a promising approach for obtaining robust predictions
and coarse grained population behavior in deterministic mathematical models. Ensemble …
and coarse grained population behavior in deterministic mathematical models. Ensemble …
Effective dynamic models of metabolic networks
M Vilkhovoy, M Minot, JD Varner - IEEE Life Sciences Letters, 2016 - ieeexplore.ieee.org
Mathematical models of biochemical networks are the useful tools to understand and ultimately
predict how cells utilize nutrients to produce valuable products. Hybrid cybernetic models …
predict how cells utilize nutrients to produce valuable products. Hybrid cybernetic models …
[HTML][HTML] Effective biophysical modeling of cell free transcription and translation processes
Transcription and translation are at the heart of metabolism and signal transduction. In this
study, we developed an effective biophysical modeling approach to simulate transcription and …
study, we developed an effective biophysical modeling approach to simulate transcription and …
Modeling glucose and subcutaneous insulin dynamics in critical care
Abstract Model-based decision support could be used to tailor insulin treatment to patients
suffering from stress hyperglycemia, while avoiding hypoglycemia. This work combines a …
suffering from stress hyperglycemia, while avoiding hypoglycemia. This work combines a …