[HTML][HTML] Minimum information for reporting next generation sequence genotyping (MIRING): Guidelines for reporting HLA and KIR genotyping via next generation …

…, A Adai, C Holcomb, EH Rozemuller, MT Penning… - Human immunology, 2015 - Elsevier
The development of next-generation sequencing (NGS) technologies for HLA and KIR
genotyping is rapidly advancing knowledge of genetic variation of these highly polymorphic loci. …

Analytical sensitivity and stability of DNA methylation testing in stool samples for colorectal cancer detection

…, FA Oort, ST van Turenhout, MT Penning… - Cellular oncology, 2012 - Springer
Background Stool-based molecular tests hold large potential for improving colorectal cancer
screening. Here, we investigated the analytical sensitivity of a DNA methylation assay on …

P177 NGS typing results using oxford nanopore sequencing: Can minion data be reliably used for HLA typing?

…, K Lang, G Schoefl, A Schmidt, V Lange, MT Penning… - Human Immunology, 2017 - Elsevier
Aim Nanopore sequencing is one of the latest DNA sequencing technologies, in which single
molecules are sequenced directly. It offers the potential of read lengths of tens of kilobases…

Quality control project of NGS HLA genotyping for the 17th International HLA and Immunogenetics Workshop

…, SGE Marsh, WP Bultitude, X Liu, D Cao, M Penning… - Human immunology, 2019 - Elsevier
The 17th International HLA and Immunogenetics Workshop (IHIW) organizers conducted a
Pilot Study (PS) in which 13 laboratories (15 groups) participated to assess the performance …

157-P: NGSengine: THE ULTIMATE TOOL FOR NGS HLA TYPING

R Kooter, FP Ruzius, MT Penning, W Mulder… - Human Immunology, 2013 - Elsevier
Aim Sequencing Based Typing (SBT) is the gold standard for high resolution typing, as the
technique analyses the actual DNA sequence of the relevant HLA regions. However, Sanger …

Transient reduction in secreted 32 kD chitinase prevents somatic embryogenesis in the carrot (Daucus carota L.) variant ts11

…, T Hendriks, EA Meijer, M Penning… - Developmental …, 1995 - Wiley Online Library
At the nonpermissive temperature, somatic embryos of the temperature‐sensitive (ts) carrot (Daucus
carota L.) cell variant ts11 only proceed beyond the globular embryo stage in the …

Evidence that both HIV and HIV-induced immunodeficiency enhance HCV replication among HCV seroconverters

M Beld, M Penning, V Lukashov, M McMorrow, M Roos… - Virology, 1998 - Elsevier
The objective of this retrospective cohort study is to assess the mechanism by which human
immunodeficiency virus type 1 (HIV) influences hepatitis C virus (HCV) replication in …

OR36 NGS allele-level typing strategy for nine KIR genes

…, K van Ham, S Vendelbosch, MT Penning… - Human Immunology, 2018 - Elsevier
Aim Killer-cell Immunoglobulin-like Receptors (KIRs) are encoded by 17 genes in the
Leukocyte Receptor Complex (LRC). These genes are highly polymorphic, on the level of …

Circulating mitochondrial nucleic acids have prognostic value for survival in patients with advanced prostate cancer

N Mehra, M Penning, J Maas, N van Daal, RH Giles… - Clinical cancer …, 2007 - AACR
Purpose: Advanced prostate cancer represents a heterogeneous disease entity with differences
in clinical behavior, response to therapy, and survival. We assessed whether we could …

Progenitor marker CD133 mRNA is elevated in peripheral blood of cancer patients with bone metastases

N Mehra, M Penning, J Maas, LV Beerepoot… - Clinical Cancer …, 2006 - AACR
Purpose: We examined whether RNA expression of CD133, a surface molecule expressed
on progenitors from hematopoietic and endothelial lineages, and CD146, a pan-endothelial …