User profiles for Marc L. Salit

Marc Salit

MITRE Fellow
Verified email at stanford.edu
Cited by 8489

[HTML][HTML] Best practices for evaluating single nucleotide variant calling methods for microbial genomics

…, JM Schupp, P Keim, JB Morrow, ML Salit… - Frontiers in …, 2015 - frontiersin.org
Innovations in sequencing technologies have allowed biologists to make incredible advances
in understanding biological systems. As experience grows, researchers increasingly …

The determination of stem cell fate by 3D scaffold structures through the control of cell shape

…, K Chatterjee, PS Pine, JH McDaniel, ML Salit… - Biomaterials, 2011 - Elsevier
Stem cell response to a library of scaffolds with varied 3D structures was investigated.
Microarray screening revealed that each type of scaffold structure induced a unique gene …

Wavelengths of spectral lines in mercury pencil lamps

CJ Sansonetti, ML Salit, J Reader - Applied optics, 1996 - opg.optica.org
The wavelengths of 19 spectral lines in the region 253–579 nm emitted by Hg pencil-type
lamps were measured by Fourier-transform spectroscopy. Precise calibration of the spectra …

Good laboratory practice for clinical next-generation sequencing informatics pipelines

…, DS Campo, RB Resnick, PG Ridge, ML Salit… - Nature …, 2015 - nature.com
We report principles and guidelines (Supplementary Note) that were developed by the Next-Generation
Sequencing: Standardization of Clinical Testing II (Nex-StoCT II) informatics …

Multiplexed precision genome editing with trackable genomic barcodes in yeast

…, RW Davis, VA Bankaitis, JE Haber, ML Salit… - Nature …, 2018 - nature.com
Our understanding of how genotype controls phenotype is limited by the scale at which we
can precisely alter the genome and assess the phenotypic consequences of each …

[HTML][HTML] Development and characterization of reference materials for genetic testing: focus on public partnerships

…, V Datta, M Williams, JM Zook, ML Salit… - Annals of Laboratory …, 2016 - ncbi.nlm.nih.gov
Characterized reference materials (RMs) are needed for clinical laboratory test development
and validation, quality control procedures, and proficiency testing to assure their quality. In …

In vivo site-specific protein tagging with diverse amines using an engineered sortase variant

JE Glasgow, ML Salit, JR Cochran - Journal of the American …, 2016 - ACS Publications
Chemoenzymatic modification of proteins is an attractive option to create highly specific
conjugates for therapeutics, diagnostics, or materials under gentle biological conditions. …

Toward achieving harmonization in a nanocytotoxicity assay measurement through an interlaboratory comparison study

…, R Maniratanachote, ML Salit… - ALTEX-Alternatives to …, 2017 - altex.org
Abstract Development of reliable cell-based nanotoxicology assays is important for evaluation
of potentially hazardous engineered nanomaterials. Challenges to producing a reliable …

[HTML][HTML] Assembly and annotation of an Ashkenazi human reference genome

…, D Puiu, JM Wagner, ND Olson, M Pertea, ML Salit… - Genome biology, 2020 - Springer
Background Thousands of experiments and studies use the human reference genome as a
resource each year. This single reference genome, GRCh38, is a mosaic created from a …

Single-element solution comparisons with a high-performance inductively coupled plasma optical emission spectrometric method

ML Salit, GC Turk, AP Lindstrom, TA Butler… - Analytical …, 2001 - ACS Publications
A solution-based inductively coupled plasma optical emission spectrometric (ICP-OES)
method is described for elemental analysis with relative expanded uncertainties on the order of …