User profiles for Marek Kimmel
Marek KimmelProfessor of Statistics and Bioengineering, Rice University Verified email at rice.edu Cited by 14063 |
Mathematical model of NF-κB regulatory module
The two-feedback-loop regulatory module of nuclear factor κB (NF-κB) signaling pathway is
modeled by means of ordinary differential equations. The constructed model involves two-…
modeled by means of ordinary differential equations. The constructed model involves two-…
Relative mutation rates at di-, tri-, and tetranucleotide microsatellite loci
R Chakraborty, M Kimmel, DN Stivers… - Proceedings of the …, 1997 - National Acad Sciences
Using the generalized stepwise mutation model, we propose a method of estimating the relative
mutation rates of microsatellite loci, grouped by the repeat motif. Applying ANOVA to the …
mutation rates of microsatellite loci, grouped by the repeat motif. Applying ANOVA to the …
[PDF][PDF] Identifying conformational states of macromolecules by eigen-analysis of resampled cryo-EM images
We present the codimensional principal component analysis (PCA), a novel and straightforward
method for resolving sample heterogeneity within a set of cryo-EM 2D projection images …
method for resolving sample heterogeneity within a set of cryo-EM 2D projection images …
An accurate, sensitive, and scalable method to identify functional sites in protein structures
Functional sites determine the activity and interactions of proteins and as such constitute the
targets of most drugs. However, the exponential growth of sequence and structure data far …
targets of most drugs. However, the exponential growth of sequence and structure data far …
The sensitivity of bladder wash flow cytometry, bladder wash cytology, and voided cytology in the detection of bladder carcinoma
RA Badalament, DK Hermansen, M Kimmel, H Gay… - Cancer, 1987 - Wiley Online Library
The sensitivity of voided urinary cytology (VUC), bladder wash cytology (BWC), and bladder
wash flow cytometry (BWFCM) in detecting cancer was studied in 70 patients with biopsy‐…
wash flow cytometry (BWFCM) in detecting cancer was studied in 70 patients with biopsy‐…
[HTML][HTML] Microarray experiments and factors which affect their reliability
…, M Iwanaszko, J Rzeszowska-Wolny, M Kimmel - Biology direct, 2015 - Springer
Oligonucleotide microarrays belong to the basic tools of molecular biology and allow for
simultaneous assessment of the expression level of thousands of genes. Analysis of microarray …
simultaneous assessment of the expression level of thousands of genes. Analysis of microarray …
Alveolar soft‐part sarcoma. A clinico‐pathologic study of half a century
PH Lieberman, MF Brennan, M Kimmel… - Cancer, 1989 - Wiley Online Library
In the period from 1923 to 1986 our pathologists examined pathologic material from 102
patients with alveolar soft‐part sarcoma (ASPS). Followup clinical data is available for 91. …
patients with alveolar soft‐part sarcoma (ASPS). Followup clinical data is available for 91. …
Stability analysis of models of cell production systems
We investigate the qualitative behaviour of the models of cell production systems, in the form
of systems of nonlinear delay differential equations. Considered are three general models …
of systems of nonlinear delay differential equations. Considered are three general models …
[PDF][PDF] Chronic infection drives Dnmt3a-loss-of-function clonal hematopoiesis via IFNγ signaling
Age-related clonal hematopoiesis (CH) is a risk factor for malignancy, cardiovascular disease,
and all-cause mortality. Somatic mutations in DNMT3A are drivers of CH, but decades …
and all-cause mortality. Somatic mutations in DNMT3A are drivers of CH, but decades …
The effect of surgical treatment on survival from early lung cancer: implications for screening
BJ Flehinger, M Kimmel, MR Melamed - Chest, 1992 - Elsevier
We assessed the effect of surgery on survival from stage I non-small-cell lung cancer based
on data collected in these screening programs. The majority of patients diagnosed in each …
on data collected in these screening programs. The majority of patients diagnosed in each …