User profiles for Mark B Gerstein
Mark GersteinProfessor of Biomedical Informatics, Yale University Verified email at yale.edu Cited by 219796 |
[PDF][PDF] The molecular taxonomy of primary prostate cancer
…, N Gehlenborg, M Gerken, MB Gerstein… - Cell, 2015 - cell.com
There is substantial heterogeneity among primary prostate cancers, evident in the spectrum
of molecular abnormalities and its variable clinical course. As part of The Cancer Genome …
of molecular abnormalities and its variable clinical course. As part of The Cancer Genome …
[HTML][HTML] An integrated map of structural variation in 2,504 human genomes
…, RE Mills, MB Gerstein… - Nature, 2015 - nature.com
Structural variants are implicated in numerous diseases and make up the majority of varying
nucleotides among human genomes. Here we describe an integrated set of eight structural …
nucleotides among human genomes. Here we describe an integrated set of eight structural …
[HTML][HTML] Expanded encyclopaedias of DNA elements in the human and mouse genomes
The human and mouse genomes contain instructions that specify RNAs and proteins and
govern the timing, magnitude, and cellular context of their production. To better delineate these …
govern the timing, magnitude, and cellular context of their production. To better delineate these …
[HTML][HTML] The genomic complexity of primary human prostate cancer
…, PW Kantoff, L Chin, SB Gabriel, MB Gerstein… - Nature, 2011 - nature.com
Prostate cancer is the second most common cause of male cancer deaths in the United
States. However, the full range of prostate cancer genomic alterations is incompletely …
States. However, the full range of prostate cancer genomic alterations is incompletely …
[HTML][HTML] Architecture of the human regulatory network derived from ENCODE data
Transcription factors bind in a combinatorial fashion to specify the on-and-off states of genes;
the ensemble of these binding events forms a regulatory network, constituting the wiring …
the ensemble of these binding events forms a regulatory network, constituting the wiring …
Paired-end mapping reveals extensive structural variation in the human genome
…, ME Hurles, SM Weissman, TT Harkins, MB Gerstein… - Science, 2007 - science.org
Structural variation of the genome involves kilobase- to megabase-sized deletions, duplications,
insertions, inversions, and complex combinations of rearrangements. We introduce high…
insertions, inversions, and complex combinations of rearrangements. We introduce high…
A systematic survey of loss-of-function variants in human protein-coding genes
Genome-sequencing studies indicate that all humans carry many genetic variants predicted
to cause loss of function (LoF) of protein-coding genes, suggesting unexpected redundancy …
to cause loss of function (LoF) of protein-coding genes, suggesting unexpected redundancy …
Transcriptional landscape of the prenatal human brain
The anatomical and functional architecture of the human brain is mainly determined by prenatal
transcriptional processes. We describe an anatomically comprehensive atlas of the mid-…
transcriptional processes. We describe an anatomically comprehensive atlas of the mid-…
Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
We systematically generated large-scale data sets to improve genome annotation for the
nematode Caenorhabditis elegans, a key model organism. These data sets include …
nematode Caenorhabditis elegans, a key model organism. These data sets include …
Mapping copy number variation by population-scale genome sequencing
Genomic structural variants (SVs) are abundant in humans, differing from other forms of
variation in extent, origin and functional impact. Despite progress in SV characterization, the …
variation in extent, origin and functional impact. Despite progress in SV characterization, the …