User profiles for Mark Pratt
Mark R. PrattCTO & Co-founder, Ultima Genomics Verified email at ucsbalum.com Cited by 18859 |
[HTML][HTML] Accurate whole human genome sequencing using reversible terminator chemistry
…, B Obradovic, T Ost, ML Parkinson, MR Pratt… - nature, 2008 - nature.com
DNA sequence information underpins genetic research, enabling discoveries of important
biological or medical benefit. Sequencing projects have traditionally used long (400–800 …
biological or medical benefit. Sequencing projects have traditionally used long (400–800 …
[HTML][HTML] svclassify: a method to establish benchmark structural variant calls
Background The human genome contains variants ranging in size from small single nucleotide
polymorphisms (SNPs) to large structural variants (SVs). High-quality benchmark small …
polymorphisms (SNPs) to large structural variants (SVs). High-quality benchmark small …
Cost-efficient whole genome-sequencing using novel mostly natural sequencing-by-synthesis chemistry and open fluidics platform
G Almogy, M Pratt, F Oberstrass, L Lee, D Mazur… - BioRxiv, 2022 - biorxiv.org
We introduce a massively parallel novel sequencing platform that combines an open flow
cell design on a circular wafer with a large surface area and mostly natural nucleotides that …
cell design on a circular wafer with a large surface area and mostly natural nucleotides that …
[HTML][HTML] Achieving high-sensitivity for clinical applications using augmented exome sequencing
Background Whole exome sequencing is increasingly used for the clinical evaluation of genetic
disease, yet the variation of coverage and sensitivity over medically relevant parts of the …
disease, yet the variation of coverage and sensitivity over medically relevant parts of the …
Listeria monocytogenes contamination of turkey franks: evaluation of a production facility
…, B Swaminathan, PS Hayes, SS Green, M Pratt… - Journal of Food …, 1990 - Elsevier
A facility which produced turkey franks that had been microbiologically linked to a case of
human listeriosis was evaluated to establish prevalence of contamination and identify potential …
human listeriosis was evaluated to establish prevalence of contamination and identify potential …
Evaluating the BMJ guidelines for economic submissions: prospective audit of economic submissions to BMJ and The Lancet
T Jefferson, R Smith, Y Yee, M Drummond, M Pratt… - Jama, 1998 - jamanetwork.com
Context.—Editorial management of articles on health economics may benefit from guidelines
for peer review and revision.Objective.—To assess whether publication (in August 1996) of …
for peer review and revision.Objective.—To assess whether publication (in August 1996) of …
Vaccines for preventing plague
T Jefferson, V Demicheli, M Pratt… - Cochrane database …, 1996 - cochranelibrary.com
Background Plague is endemic in China, Mongolia, Burma, Vietnam, Indonesia, India, large
parts of Southern Africa, the United States and South America. There are three types of …
parts of Southern Africa, the United States and South America. There are three types of …
The effectiveness and safety of vaccines against human anthrax: a systematic review
V Demicheli, D Rivetti, JJ Deeks, T Jefferson, M Pratt - Vaccine, 1998 - Elsevier
We report on the results of a systematic review of existing controlled clinical trials undertaken
to assess the effectiveness and safety of vaccines against human anthrax in relation to …
to assess the effectiveness and safety of vaccines against human anthrax in relation to …
[HTML][HTML] An antibody-free LC-MS/MS method for the quantification of intact insulin-like growth factors 1 and 2 in human plasma
MS Pratt, M van Faassen, N Remmelts… - Analytical and …, 2021 - Springer
Insulin-like growth factors 1 and 2 (IGF-1 and IGF-2) are important biomarkers in research
and diagnosis of growth disorders. Quantitative analysis is performed using various ligand-…
and diagnosis of growth disorders. Quantitative analysis is performed using various ligand-…
Evaluation of an automated beef carcass washing and sanitizing system under production conditions
…, HD Naumann, RT Marshall, JM Damare, M Pratt… - Journal of Food …, 1987 - Elsevier
Beef half carcasses were hand- or machine-washed and then machine-sanitized with 1.5%
acetic acid. Sanitizer was applied at 14.4 or 52C. Counts of Escherichia coli, …
acetic acid. Sanitizer was applied at 14.4 or 52C. Counts of Escherichia coli, …