Scirpy: a Scanpy extension for analyzing single-cell T-cell receptor-sequencing data

G Sturm, T Szabo, G Fotakis, M Haider, D Rieder… - …, 2020 - academic.oup.com
Advances in single-cell technologies have enabled the investigation of T-cell phenotypes
and repertoires at unprecedented resolution and scale. Bioinformatic methods for the efficient …

Evolutionary history of an Alpine Archaeognath (Machilis pallida): Insights from different variant

M Haider, MP Schilling, MH Moest… - Ecology and …, 2023 - Wiley Online Library
Reconstruction of species histories is a central aspect of evolutionary biology. Patterns of
genetic variation within and among populations can be leveraged to elucidate evolutionary …

[HTML][HTML] Major range loss predicted from lack of heat adaptability in an alpine Drosophila species

…, A Gamisch, AA Hoffmann, B Seifert, M Haider… - Science of the Total …, 2019 - Elsevier
Climate warming is threatening biodiversity worldwide. Climate specialists such as alpine
species are especially likely to be vulnerable. Adaptation by rapid evolution is the only long-…

NeoFuse: predicting fusion neoantigens from RNA sequencing data

G Fotakis, D Rieder, M Haider, Z Trajanoski… - …, 2020 - academic.oup.com
Gene fusions can generate immunogenic neoantigens that mediate anticancer immune
responses. However, their computational prediction from RNA sequencing (RNA-seq) data …

[HTML][HTML] Towards a standardised set of data analyses for long-term genetic monitoring of grouse using non-invasive sampling: a case study on western capercaillie

T Zeni, M Haider, S Vallant, R Lentner, FM Steiner… - Conservation …, 2024 - Springer
Genetic monitoring has become a popular instrument in the conservation of endangered
species, allowing to estimate size and genetic structure of wild populations. Long-term …

The influence of sample size on two approaches to estimate Black Grouse Lyrurus tetrix population size using non‐invasive sampling methods

M Haider, R Steixner, T Zeni, S Vallant, R Lentner… - Ibis, 2024 - Wiley Online Library
Population size is an important parameter to monitor for species conservation and management.
This is especially important for rare and endangered species, as declines can give …

Evolutionary history of an Alpine archaeognath (Machilis pallida) – insights from different variant types

M Haider, MP Schilling, MH Moest, FM Steiner… - bioRxiv, 2021 - biorxiv.org
Reconstruction of species histories is a central aspect of evolutionary biology. Patterns of
genetic variation within and among populations can be leveraged to elucidate evolutionary …

[PDF][PDF] MASTERARBEIT/MASTER'S THESIS

D Haider - 2019 - phaidra.univie.ac.at
Der Zugang zu Sprache im weiten Sinne und die Aneignung von Zweitsprache im Speziellen
wird hier über einen lustvollen und freien Zugang zu Literatur gedacht. Dabei spielt …

[PDF][PDF] Territoriality, mobility, and population structure of an Eastern Alpine rock ptarmigan (Lagopus muta helvetica) population

N Feistmantl - karwendel.org
… Another person who always supported us was Marlene Haider whom I also want to thank.
Also I would like to thank the technical assistants, Philipp Andesner, Elisabeth Zangerl and …

[PDF][PDF] Combining Geometric Morphometrics and population genetics to evaluate effects of persistent organic pollutants in Alpine Bumblebees

S Gurten - 2021 - parcs.at
… ; Marlene Haider for the technical support with GeneMarker® for microsatellite analysis;
Wolfgang Moche & the entire laboratory team in Vienna for chemical advice; and Martin P. …