An integrated mass spectrometric and computational framework for the analysis of protein interaction networks
Biological systems are controlled by protein complexes that associate into dynamic protein
interaction networks. We describe a strategy that analyzes protein complexes through the …
interaction networks. We describe a strategy that analyzes protein complexes through the …
[HTML][HTML] Cryo-EM structures of Trypanosoma brucei gambiense ISG65 with human complement C3 and C3b and their roles in alternative pathway restriction
…, F Zahedifard, A Šubrtova, M Šafner, M Hubalek… - Nature …, 2023 - nature.com
African Trypanosomes have developed elaborate mechanisms to escape the adaptive immune
response, but little is known about complement evasion particularly at the early stage of …
response, but little is known about complement evasion particularly at the early stage of …
[HTML][HTML] Bacterial nanotubes as a manifestation of cell death
…, K Muchová, H Šanderová, M Hubálek… - Nature …, 2020 - nature.com
Bacterial nanotubes are membranous structures that have been reported to function as
conduits between cells to exchange DNA, proteins, and nutrients. Here, we investigate the …
conduits between cells to exchange DNA, proteins, and nutrients. Here, we investigate the …
[HTML][HTML] Human histone deacetylase 6 shows strong preference for tubulin dimers over assembled microtubules
…, D Trapl, P Baranova, B Havlinova, M Hubalek… - Scientific reports, 2017 - nature.com
Human histone deacetylase 6 (HDAC6) is the major deacetylase responsible for removing
the acetyl group from Lys40 of α-tubulin (αK40), which is located lumenally in polymerized …
the acetyl group from Lys40 of α-tubulin (αK40), which is located lumenally in polymerized …
[HTML][HTML] Random protein sequences can form defined secondary structures and are well-tolerated in vivo
…, K Hofbauerová, H Jindrová, M Hubálek… - Scientific Reports, 2017 - nature.com
The protein sequences found in nature represent a tiny fraction of the potential sequences
that could be constructed from the 20-amino-acid alphabet. To help define the properties that …
that could be constructed from the 20-amino-acid alphabet. To help define the properties that …
Proteomic analysis of wheat proteins recognized by IgE antibodies of allergic patients
P Šotkovský, M Hubálek, L Hernychová, P Novák… - …, 2008 - Wiley Online Library
Wheat belongs to six major food allergens inducing IgE‐mediated hypersensitivity reaction
manifesting as cutaneous, gastrointestinal, and respiratory symptoms. Although cereals are a …
manifesting as cutaneous, gastrointestinal, and respiratory symptoms. Although cereals are a …
[HTML][HTML] Dinucleoside polyphosphates act as 5′-RNA caps in bacteria
…, M Culka, H Šanderová, M Hubálek… - Nature …, 2020 - nature.com
It has been more than 50 years since the discovery of dinucleoside polyphosphates (Np n
Ns) and yet their roles and mechanisms of action remain unclear. Here, we show that both …
Ns) and yet their roles and mechanisms of action remain unclear. Here, we show that both …
Proteomic analysis of anti‐Francisella tularensis LVS antibody response in murine model of tularemia
J Havlasová, L Hernychová, M Brychta, M Hubálek… - …, 2005 - Wiley Online Library
Francisella tularensis live vaccine strain infection of mice has been established as an
experimental model of tularemia that is suitable for studies of immune mechanisms against the …
experimental model of tularemia that is suitable for studies of immune mechanisms against the …
[HTML][HTML] Human DNA-damage-inducible 2 protein is structurally and functionally distinct from its yeast ortholog
…, F Sedlák, J Belza, J Brynda, P Šácha, M Hubálek… - Scientific reports, 2016 - nature.com
Although Ddi1-like proteins are conserved among eukaryotes, their biological functions
remain poorly characterized. Yeast Ddi1 has been implicated in cell cycle regulation, DNA-…
remain poorly characterized. Yeast Ddi1 has been implicated in cell cycle regulation, DNA-…
1, 3‐Diketone‐Modified Nucleotides and DNA for Cross‐Linking with Arginine‐Containing Peptides and Proteins
DL Leone, M Hubálek, R Pohl, V Sýkorová… - Angewandte …, 2021 - Wiley Online Library
Linear or branched 1,3‐diketone‐linked thymidine 5′‐O‐mono‐ and triphosphate were
synthesized through CuAAC click reaction of diketone‐alkynes with 5‐azidomethyl‐dUMP or ‐…
synthesized through CuAAC click reaction of diketone‐alkynes with 5‐azidomethyl‐dUMP or ‐…