[HTML][HTML] 3.5 KJPNv2: an allele frequency panel of 3552 Japanese individuals including the X chromosome

S Tadaka, F Katsuoka, M Ueki, K Kojima… - Human Genome …, 2019 - nature.com
The first step towards realizing personalized healthcare is to catalog the genetic variations
in a population. Since the dissemination of individual-level genomic information is strictly …

[HTML][HTML] Automated acquisition of explainable knowledge from unannotated histopathology images

Y Yamamoto, T Tsuzuki, J Akatsuka, M Ueki… - Nature …, 2019 - nature.com
Deep learning algorithms have been successfully used in medical image classification. In
the next stage, the technology of acquiring explainable knowledge from medical images is …

[HTML][HTML] Improved statistics for genome-wide interaction analysis

M Ueki, HJ Cordell - PLoS genetics, 2012 - journals.plos.org
Recently, Wu and colleagues [1] proposed two novel statistics for genome-wide interaction
analysis using case/control or case-only data. In computer simulations, their proposed case/…

A Pollen Coat–Inducible Autoinhibited Ca2+-ATPase Expressed in Stigmatic Papilla Cells Is Required for Compatible Pollination in the Brassicaceae

…, T Entani, H Shimosato-Asano, M Ueki… - The Plant …, 2014 - academic.oup.com
In the Brassicaceae, intraspecific non-self pollen (compatible pollen) can germinate and grow
into stigmatic papilla cells, while self-pollen or interspecific pollen is rejected at this stage. …

[HTML][HTML] A mutation of COX6A1 causes a recessive axonal or mixed form of Charcot-Marie-Tooth disease

…, M Hayashi, A Abe, C Numakura, M Ueki… - The American Journal of …, 2014 - cell.com
Charcot-Marie-Tooth disease (CMT) is the most common inherited neuropathy characterized
by clinical and genetic heterogeneity. Although more than 30 loci harboring CMT-causing …

[HTML][HTML] Improved metabolomic data-based prediction of depressive symptoms using nonlinear machine learning with feature selection

Y Takahashi, M Ueki, M Yamada, G Tamiya… - Translational …, 2020 - nature.com
To solve major limitations in algorithms for the metabolite-based prediction of psychiatric
phenotypes, a novel prediction model for depressive symptoms based on nonlinear feature …

[HTML][HTML] Clustering by phenotype and genome-wide association study in autism

…, S Mizuno, S Ogishima, G Tamiya, M Ueki… - Translational …, 2020 - nature.com
Autism spectrum disorder (ASD) has phenotypically and genetically heterogeneous characteristics.
A simulation study demonstrated that attempts to categorize patients with a complex …

A note on automatic variable selection using smooth-threshold estimating equations

M Ueki - Biometrika, 2009 - academic.oup.com
This paper develops smooth-threshold estimating equations that can automatically eliminate
irrelevant parameters by setting them as zero. The resulting estimator enjoys the oracle …

Artificial intelligence powered statistical genetics in biobanks

A Narita, M Ueki, G Tamiya - Journal of Human Genetics, 2021 - nature.com
Large-scale, sometimes nationwide, prospective genomic cohorts biobanking rich biological
specimens such as blood, urine and tissues, have been established and released their vast …

[HTML][HTML] Machine learning for effectively avoiding overfitting is a crucial strategy for the genetic prediction of polygenic psychiatric phenotypes

Y Takahashi, M Ueki, G Tamiya, S Ogishima… - Translational …, 2020 - nature.com
The accuracy of previous genetic studies in predicting polygenic psychiatric phenotypes has
been limited mainly due to the limited power in distinguishing truly susceptible variants from …