[HTML][HTML] Clinical whole-exome sequencing for the diagnosis of mendelian disorders

…, DM Muzny, JG Reid, MN Bainbridge… - … England Journal of …, 2013 - Mass Medical Soc
Background Whole-exome sequencing is a diagnostic approach for the identification of
molecular defects in patients with suspected genetic disorders. Methods We developed technical…

Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing

G Robertson, M Hirst, M Bainbridge, M Bilenky… - Nature …, 2007 - nature.com
We developed a method, ChIP-sequencing (ChIP-seq), combining chromatin immunoprecipitation
(ChIP) and massively parallel sequencing to identify mammalian DNA sequences …

Molecular findings among patients referred for clinical whole-exome sequencing

…, W Alcaraz, H Cui, M Walkiewicz, J Reid, M Bainbridge… - Jama, 2014 - jamanetwork.com
Importance Clinical whole-exome sequencing is increasingly used for diagnostic evaluation
of patients with suspected genetic disorders. Objective To perform clinical whole-exome …

[HTML][HTML] Whole-genome sequencing in a patient with Charcot–Marie–Tooth neuropathy

…, DCY Chen, L Nazareth, M Bainbridge… - … England Journal of …, 2010 - Mass Medical Soc
Background Whole-genome sequencing may revolutionize medical diagnostics through rapid
identification of alleles that cause disease. However, even in cases with simple patterns of …

Demographic history and rare allele sharing among human populations

…, RA Gibbs, D Wheeler, M Bainbridge… - Proceedings of the …, 2011 - National Acad Sciences
High-throughput sequencing technology enables population-level surveys of human genomic
variation. Here, we examine the joint allele frequency distributions across continental …

Profiling the HeLa S3 transcriptome using randomly primed cDNA and massively parallel short-read sequencing

RD Morin, M Bainbridge, A Fejes, M Hirst… - …, 2008 - Future Science
Sequence-based methods for transcriptome characterization have typically relied on generation
of either serial analysis of gene expression tags or expressed sequence tags. Although …

[HTML][HTML] Rapid whole-genome sequencing decreases infant morbidity and cost of hospitalization

…, RH Kaplan, R Kronick, MN Bainbridge… - NPJ genomic …, 2018 - nature.com
Genetic disorders are a leading cause of morbidity and mortality in infants. Rapid whole-genome
sequencing (rWGS) can diagnose genetic disorders in time to change acute medical or …

FindPeaks 3.1: a tool for identifying areas of enrichment from massively parallel short-read sequencing technology

…, G Robertson, M Bilenky, R Varhol, M Bainbridge… - …, 2008 - academic.oup.com
Next-generation sequencing can provide insight into protein–DNA association events on a
genome-wide scale, and is being applied in an increasing number of applications in …

Whole-genome sequencing for optimized patient management

MN Bainbridge, W Wiszniewski, DR Murdock… - Science translational …, 2011 - science.org
Whole-genome sequencing of patient DNA can facilitate diagnosis of a disease, but its
potential for guiding treatment has been under-realized. We interrogated the complete genome …

Spatial variation in the fine-structure constant–new results from VLT/UVES

…, RF Carswell, MB Bainbridge… - Monthly Notices of …, 2012 - academic.oup.com
Quasar absorption lines provide a precise test of whether the fine-structure constant, α, is
the same in different places and through cosmological time. We present a new analysis of a …