User profiles for Matthew Cieslak

Matthew Cieslak

University of Pennsylvania
Verified email at pennmedicine.upenn.edu
Cited by 3576

[HTML][HTML] Controllability of structural brain networks

S Gu, F Pasqualetti, M Cieslak, QK Telesford… - Nature …, 2015 - nature.com
Cognitive function is driven by dynamic interactions between large-scale neural circuits or
networks, enabling behaviour. However, fundamental principles constraining these dynamic …

Development of structure–function coupling in human brain networks during youth

…, RF Betzel, B Larsen, M Cieslak… - Proceedings of the …, 2020 - National Acad Sciences
The protracted development of structural and functional brain connectivity within distributed
association networks coincides with improvements in higher-order cognitive processes such …

[HTML][HTML] Stimulation-based control of dynamic brain networks

…, F Pasqualetti, S Gu, M Cieslak… - PLoS computational …, 2016 - journals.plos.org
The ability to modulate brain states using targeted stimulation is increasingly being employed
to treat neurological disorders and to enhance human performance. Despite the growing …

Mitigating head motion artifact in functional connectivity MRI

R Ciric, AFG Rosen, G Erus, M Cieslak, A Adebimpe… - Nature protocols, 2018 - nature.com
Participant motion during functional magnetic resonance image (fMRI) acquisition produces
spurious signal fluctuations that can confound measures of functional connectivity. Without …

Intrinsic activity development unfolds along a sensorimotor–association cortical axis in youth

…, DS Bassett, MA Bertolero, M Cieslak… - Nature …, 2023 - nature.com
Animal studies of neurodevelopment have shown that recordings of intrinsic cortical activity
evolve from synchronized and high amplitude to sparse and low amplitude as plasticity …

QSIPrep: an integrative platform for preprocessing and reconstructing diffusion MRI data

M Cieslak, PA Cook, X He, FC Yeh, T Dhollander… - Nature …, 2021 - nature.com
Diffusion-weighted magnetic resonance imaging (dMRI) is the primary method for noninvasively
studying the organization of white matter in the human brain. Here we introduce QSIPrep…

[HTML][HTML] Optimal trajectories of brain state transitions

S Gu, RF Betzel, MG Mattar, M Cieslak, PR Delio… - NeuroImage, 2017 - Elsevier
The complexity of neural dynamics stems in part from the complexity of the underlying
anatomy. Yet how white matter structure constrains how the brain transitions from one cognitive …

[HTML][HTML] t-Distributed Stochastic Neighbor Embedding (t-SNE): A tool for eco-physiological transcriptomic analysis

MC Cieslak, AM Castelfranco, V Roncalli, PH Lenz… - Marine genomics, 2020 - Elsevier
High-throughput RNA sequencing (RNA-Seq) has transformed the ecophysiological assessment
of individual plankton species and communities. However, the technology generates …

Cortical-subcortical structural connections support transcranial magnetic stimulation engagement of the amygdala

VJ Sydnor, M Cieslak, R Duprat, J Deluisi… - Science …, 2022 - science.org
The amygdala processes valenced stimuli, influences emotion, and exhibits aberrant activity
across anxiety disorders, depression, and PTSD. Interventions modulating amygdala …

Analysis of task-based functional MRI data preprocessed with fMRIPrep

…, IK Amlien, F Liem, N Jacoby, H Stojić, M Cieslak… - Nature protocols, 2020 - nature.com
Functional magnetic resonance imaging (fMRI) is a standard tool to investigate the neural
correlates of cognition. fMRI noninvasively measures brain activity, allowing identification of …