T-box gene tbx5 is essential for formation of the pectoral limb bud

D Ahn, MJ Kourakis, LA Rohde, LM Silver, RK Ho - Nature, 2002 - nature.com
The T-box genes Tbx4 and Tbx5 have been shown to have key functions in the specification
of the identity of the vertebrate forelimb (Tbx5) and hindlimb (Tbx4) 1 , 2 . Here we show that …

Parallel visual circuitry in a basal chordate

MJ Kourakis, C Borba, A Zhang, E Newman-Smith… - Elife, 2019 - elifesciences.org
10.7554/eLife.44753.001 A common CNS architecture is observed in all chordates, from
vertebrates to basal chordates like the ascidian Ciona. Ciona stands apart among chordates in …

Conserved anterior boundaries of Hox gene expression in the central nervous system of the leechHelobdella

MJ Kourakis, VA Master, DK Lokhorst… - Developmental …, 1997 - Elsevier
Molecular developmental studies of fly and mouse embryos have shown that the identity of
individual body segments is controlled by a suite of homeobox-containing genes called the …

[PDF][PDF] Antagonistic inhibitory circuits integrate visual and gravitactic behaviors

…, C Borba, E Newman-Smith, I Guleria, MJ Kourakis… - Current Biology, 2020 - cell.com
Larvae of the tunicate Ciona intestinalis possess a central nervous system of 177 neurons.
This simplicity has facilitated the generation of a complete synaptic connectome. As …

Photoreceptor specialization and the visuomotor repertoire of the primitive chordate Ciona

…, E Newman-Smith, MJ Kourakis… - Journal of …, 2018 - journals.biologists.com
The swimming tadpole larva of Ciona has one of the simplest central nervous systems (CNSs)
known, with only 177 neurons. Despite its simplicity, the Ciona CNS has a common …

Reciprocal and dynamic polarization of planar cell polarity core components and myosin

E Newman-Smith, MJ Kourakis, W Reeves, M Veeman… - Elife, 2015 - elifesciences.org
10.7554/eLife.05361.001 The Ciona notochord displays planar cell polarity (PCP), with
anterior localization of Prickle (Pk) and Strabismus (Stbm). We report that a myosin is polarized …

[HTML][HTML] Disruption of left-right axis specification in Ciona induces molecular, cellular, and functional defects in asymmetric brain structures

MJ Kourakis, M Bostwick, A Zabriskie, WC Smith - BMC biology, 2021 - Springer
Background Left-right asymmetries are a common feature of metazoans and can be found
in a number of organs including the nervous system. These asymmetries are particularly …

[PDF][PDF] A single oscillating proto-hypothalamic neuron gates taxis behavior in the primitive chordate Ciona

J Chung, E Newman-Smith, MJ Kourakis, Y Miao… - Current Biology, 2023 - cell.com
Ciona larvae display a number of behaviors, including negative phototaxis. In negative
phototaxis, the larvae first perform short spontaneous rhythmic casting swims. As larvae are cast …

Combined‐method phylogenetic analysis of Hox and ParaHox genes of the metazoa

MJ Kourakis, MQ Martindale - Journal of Experimental Zoology, 2000 - Wiley Online Library
The clustered Hox genes show a conserved role in patterning the body axis of bilaterian
metazoans. Increasingly, a broader phylogenetic sampling of non‐model system organisms is …

Hox gene duplication and deployment in the annelid leech Helobdella

MJ Kourakis, MQ Martindale - Evolution & development, 2001 - Wiley Online Library
The segmented leeches are members of the phylum Annelida within the Lophotrochozoa.
Here, we describe the isolation of a new Hox gene, Lox18, in the leech Helobdella triserialis. …