User profiles for Meet Barot

Meet Barot

PhD Student, Center for Data Science, New York University
Verified email at nyu.edu
Cited by 561

[HTML][HTML] The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

…, DCE Koo, R Bonneau, V Gligorijević, M Barot… - Genome biology, 2019 - Springer
Background The Critical Assessment of Functional Annotation (CAFA) is an ongoing, global,
community-driven effort to evaluate and improve the computational annotation of protein …

deepNF: deep network fusion for protein function prediction

V Gligorijević, M Barot, R Bonneau - Bioinformatics, 2018 - academic.oup.com
Motivation The prevalence of high-throughput experimental methods has resulted in an
abundance of large-scale molecular and functional interaction networks. The connectivity of …

NetQuilt: deep multispecies network-based protein function prediction using homology-informed network similarity

M Barot, V Gligorijević, K Cho, R Bonneau - Bioinformatics, 2021 - academic.oup.com
Motivation Transferring knowledge between species is challenging: different species
contain distinct proteomes and cellular architectures, which cause their proteins to carry out …

[HTML][HTML] Learning sequence, structure, and function representations of proteins with language models

T Hamamsy, M Barot, JT Morton, M Steinegger… - bioRxiv, 2023 - ncbi.nlm.nih.gov
The sequence-structure-function relationships that ultimately generate the diversity of extant
observed proteins is complex, as proteins bridge the gap between multiple informational …

Automated Protein Function Description for Novel Class Discovery

M Barot, V Gligorijevic, R Bonneau, K Cho - bioRxiv, 2022 - biorxiv.org
Abstract Knowledge of protein function is necessary for understanding biological systems,
but the discovery of new sequences from high-throughput sequencing technologies far …

Deep Learning for Protein Function Prediction and Novel Class Discovery

M Barot - 2023 - search.proquest.com
High-throughput sequencing technologies have led to an exponential increase in the
number of sequenced proteins. This growth has resulted in a large number of proteins whose …

Meeting the relational challenge of ecological engineering within ecological sciences

S Barot, JC Lata, G Lacroix - Ecological Engineering, 2012 - Elsevier
… why meeting this challenge is required for the full development of EE and why this would
also highly benefit fundamental ecology. Finally, we give some hints on how to meet this …

[PDF][PDF] Sexual and reproductive health and rights are key to global development: the case for ramping up investment

S Barot - 2015 - guttmacher.org
… benefits that would result from meeting women’s need for sexual and reproductive health
services throughout the developing world. Fully meeting these needs would prevent tens of …

[PDF][PDF] Nutraceutical properties of green, red and brown seaweeds from the Eco-sensitive Zone, India as potential dietary and pharmaceutical applications

M Barot, NK JI, RN Kumar - … Festival-Young Scientists' Meet …, 2015 - researchgate.net
… To meet this demand, utilization of ocean and its resources is a suitable alternate. As a
developing country, Indian stretches about 7500 km of coastal lines supported with 844 species …

Microstructural and Tensile Properties Evolutions of Direct-Aged Waspaloy Produced by Wire Arc Additive Manufacturing

M Sazerat, A Nait-Ali, L Barot, A Cervellon… - TMS Annual Meeting & …, 2023 - Springer
The microstructure Microstructures and tensile properties Tensile properties of direct-aged
Waspaloy Waspaloy manufactured using wire arc-based Cold Metal Transfer (CMT) have …