User profiles for Melanie Prarat
Melanie PraratOhio Animal Disease Diagnostic Laboratory Verified email at agri.ohio.gov Cited by 800 |
[HTML][HTML] GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians
Background Processing and analyzing whole genome sequencing (WGS) is computationally
intense: a single Illumina MiSeq WGS run produces ~ 1 million 250-base-pair reads for …
intense: a single Illumina MiSeq WGS run produces ~ 1 million 250-base-pair reads for …
[HTML][HTML] Enhancing the one health initiative by using whole genome sequencing to monitor antimicrobial resistance of animal pathogens: Vet-LIRN collaborative …
…, LB Goodman, PK Mitchell, Y Zhang, M Prarat… - BMC veterinary …, 2019 - Springer
Background Antimicrobial resistance (AMR) of bacterial pathogens is an emerging public
health threat. This threat extends to pets as it also compromises our ability to treat their …
health threat. This threat extends to pets as it also compromises our ability to treat their …
Metagenomic sequencing for identification of Xylella fastidiosa from leaf samples
…, G Marchi, S Campigli, MA Hansen, E Bush, M Prarat… - Msystems, 2021 - Am Soc Microbiol
Xylella fastidiosa (Xf) is a globally distributed plant-pathogenic bacterium. The primary
control strategy for Xf diseases is eradicating infected plants; therefore, timely and accurate …
control strategy for Xf diseases is eradicating infected plants; therefore, timely and accurate …
[HTML][HTML] New variants of porcine epidemic diarrhea virus with large deletions in the spike protein, identified in the United States, 2016-2017
Four types of porcine epidemic diarrhea virus (PEDV) variants with a large deletion in the
spike protein were detected, together with the original US PEDV, from pig fecal and oral fluid …
spike protein were detected, together with the original US PEDV, from pig fecal and oral fluid …
[HTML][HTML] Detection and genomic characterization of Senecavirus A, Ohio, USA, 2015
Using a day as our unit of analysis (ie, n= 60 in the analysis), we first assessed Pearson
product-moment correlations between news coverage, social media mentions, and online …
product-moment correlations between news coverage, social media mentions, and online …
Multi-laboratory evaluation of the Illumina iSeq platform for whole genome sequencing of Salmonella, Escherichia coli and Listeria
…, R Franklin-Guild, Y Zhang, M Prarat… - Microbial …, 2022 - microbiologyresearch.org
There is a growing need for public health and veterinary laboratories to perform whole
genome sequencing (WGS) for monitoring antimicrobial resistance (AMR) and protecting the …
genome sequencing (WGS) for monitoring antimicrobial resistance (AMR) and protecting the …
Genomics accurately predicts antimicrobial resistance in Staphylococcus pseudintermedius collected as part of Vet-LIRN resistance monitoring
Whole-genome sequencing (WGS) has changed our understanding of bacterial pathogens,
aiding outbreak investigations and advancing our knowledge of their genetic features. …
aiding outbreak investigations and advancing our knowledge of their genetic features. …
Patterns of gene expression in swine macrophages infected with classical swine fever virus detected by microarray
…, LG Holinka, I Fernandez-Sainz, C Carrillo, MV Prarat… - Virus Research, 2010 - Elsevier
Infection of domestic swine with highly virulent, classical swine fever virus (CSFV) strain
Brescia, causes lethal disease in all infected animals. However, the molecular mechanisms …
Brescia, causes lethal disease in all infected animals. However, the molecular mechanisms …
Antimicrobial-Resistant Escherichia coli, Enterobacter cloacae, Enterococcus faecium, and Salmonella Kentucky Harboring Aminoglycoside and Beta-Lactam …
The practice of feeding raw meat-based diets to dogs has grown in popularity worldwide in
recent years. However, there are public health risks in handling and feeding raw meat-based …
recent years. However, there are public health risks in handling and feeding raw meat-based …
Next-generation sequencing capacity and capabilities within the National Animal Health Laboratory Network
With the cost of next-generation sequencing (NGS) decreasing, this technology is rapidly
being integrated into the workflows of veterinary clinical and diagnostic laboratories nationwide…
being integrated into the workflows of veterinary clinical and diagnostic laboratories nationwide…