The Pfam protein families database
…, S Griffiths‐Jones, A Khanna, M Marshall… - Nucleic acids …, 2004 - academic.oup.com
Pfam is a large collection of protein families and domains. Over the past 2 years the number
of families in Pfam has doubled and now stands at 6190 (version 10.0). Methodology …
of families in Pfam has doubled and now stands at 6190 (version 10.0). Methodology …
A census of human cancer genes
PA Futreal, L Coin, M Marshall, T Down… - Nature reviews …, 2004 - nature.com
A central aim of cancer research has been to identify the mutated genes that are causally
implicated in oncogenesis ('cancer genes'). After two decades of searching, how many have …
implicated in oncogenesis ('cancer genes'). After two decades of searching, how many have …
The Pfam protein families database
…, S Griffiths-Jones, KL Howe, M Marshall… - Nucleic acids …, 2002 - academic.oup.com
Pfam is a large collection of protein multiple sequence alignments and profile hidden
Markov models. Pfam is available on the World Wide Web in the UK at http://www.sanger.ac.uk/…
Markov models. Pfam is available on the World Wide Web in the UK at http://www.sanger.ac.uk/…
Pfam: clans, web tools and services
…, T Lassmann, S Moxon, M Marshall… - Nucleic acids …, 2006 - academic.oup.com
Pfam is a database of protein families that currently contains 7973 entries (release 18.0). A
recent development in Pfam has enabled the grouping of related families into clans. Pfam …
recent development in Pfam has enabled the grouping of related families into clans. Pfam …
A uniform system for microRNA annotation
MicroRNAs (miRNAs) are small noncoding RNA gene products about 22 nt long that are
processed by Dicer from precursors with a characteristic hairpin secondary structure. …
processed by Dicer from precursors with a characteristic hairpin secondary structure. …
Rfam: an RNA family database
S Griffiths-Jones, A Bateman, M Marshall… - Nucleic acids …, 2003 - academic.oup.com
Rfam is a collection of multiple sequence alignments and covariance models representing
non-coding RNA families. Rfam is available on the web in the UK at http://www.sanger.ac.uk/…
non-coding RNA families. Rfam is available on the web in the UK at http://www.sanger.ac.uk/…
Rfam: annotating non-coding RNAs in complete genomes
S Griffiths-Jones, S Moxon, M Marshall… - Nucleic acids …, 2005 - academic.oup.com
Rfam is a comprehensive collection of non-coding RNA (ncRNA) families, represented by
multiple sequence alignments and profile stochastic context-free grammars. Rfam aims to …
multiple sequence alignments and profile stochastic context-free grammars. Rfam aims to …
Whole‐genome sequencing identifies EN1 as a determinant of bone density and fracture
…, A Hofman, C Wibom, GJ Tranah, M Marshall… - Nature, 2015 - nature.com
The extent to which low‐frequency (minor allele frequency (MAF) between 1–5%) and rare (MAF
≤ 1%) variants contribute to complex traits and disease in the general population is …
≤ 1%) variants contribute to complex traits and disease in the general population is …
Brief report: intestinal dysbiosis in ankylosing spondylitis
…, PC Robinson, B Gardiner, M Marshall… - Arthritis & …, 2015 - Wiley Online Library
Objective Ankylosing spondylitis (AS) is a common, highly heritable immune‐mediated
arthropathy that occurs in genetically susceptible individuals exposed to an unknown but likely …
arthropathy that occurs in genetically susceptible individuals exposed to an unknown but likely …
i Pfam: visualization of protein–protein interactions in pdb at domain and amino acid resolutions
There are many resources that contain information about binary interactions between proteins.
However, protein interactions are defined by only a subset of residues in any protein. We …
However, protein interactions are defined by only a subset of residues in any protein. We …