User profiles for Michael Clerx
Michael ClerxResearcher, University of Nottingham Verified email at nottingham.ac.uk Cited by 708 |
Myokit: a simple interface to cardiac cellular electrophysiology
Myokit is a new powerful and versatile software tool for modeling and simulation of cardiac
cellular electrophysiology. Myokit consists of an easy-to-read modeling language, a graphical …
cellular electrophysiology. Myokit consists of an easy-to-read modeling language, a graphical …
Calibration of ionic and cellular cardiac electrophysiology models
Cardiac electrophysiology models are among the most mature and well‐studied mathematical
models of biological systems. This maturity is bringing new challenges as models are …
models of biological systems. This maturity is bringing new challenges as models are …
[PDF][PDF] Four ways to fit an ion channel model
Mathematical models of ionic currents are used to study the electrophysiology of the heart,
brain, gut, and several other organs. Increasingly, these models are being used predictively in …
brain, gut, and several other organs. Increasingly, these models are being used predictively in …
Probabilistic inference on noisy time series (PINTS)
Time series models are ubiquitous in science, arising in any situation where researchers seek
to understand how a system's behaviour changes over time. A key problem in time series …
to understand how a system's behaviour changes over time. A key problem in time series …
[HTML][HTML] Reproducible model development in the cardiac electrophysiology Web Lab
The modelling of the electrophysiology of cardiac cells is one of the most mature areas of
systems biology. This extended concentration of research effort brings with it new challenges, …
systems biology. This extended concentration of research effort brings with it new challenges, …
Accounting for variability in ion current recordings using a mathematical model of artefacts in voltage-clamp experiments
Mathematical models of ion channels, which constitute indispensable components of action
potential models, are commonly constructed by fitting to whole-cell patch-clamp data. In a …
potential models, are commonly constructed by fitting to whole-cell patch-clamp data. In a …
[PDF][PDF] Rapid characterization of hERG channel kinetics I: using an automated high-throughput system
Predicting how pharmaceuticals may affect heart rhythm is a crucial step in drug development
and requires a deep understanding of a compound's action on ion channels. In vitro hERG …
and requires a deep understanding of a compound's action on ion channels. In vitro hERG …
CellML 2.0
We present here CellML 2.0, an XML-based language for describing and exchanging
mathematical models of physiological systems. MathML embedded in CellML documents is used …
mathematical models of physiological systems. MathML embedded in CellML documents is used …
[PDF][PDF] Rapid characterization of hERG channel kinetics II: temperature dependence
Ion channel behavior can depend strongly on temperature, with faster kinetics at physiological
temperatures leading to considerable changes in currents relative to room temperature. …
temperatures leading to considerable changes in currents relative to room temperature. …
Autocorrelated measurement processes and inference for ordinary differential equation models of biological systems
Ordinary differential equation models are used to describe dynamic processes across
biology. To perform likelihood-based parameter inference on these models, it is necessary to …
biology. To perform likelihood-based parameter inference on these models, it is necessary to …