Interaction of the unique N-terminal region of tyrosine kinase p56lck with cytoplasmic domains of CD4 and CD8 is mediated by cysteine motifs

JM Turner, MH Brodsky, BA Irving, SD Levin… - Cell, 1990 - cell.com
~ 56”~, a lymphocyte-specific member of the SIC family of cytoplasmic protein-tyrosine kinases,
is associated noncovalently with the cell surface glycoproteins CD4 and CD8, which are …

[HTML][HTML] Drosophila p53 binds a damage response element at the reaper locus

MH Brodsky, W Nordstrom, G Tsang, E Kwan… - Cell, 2000 - cell.com
The tumor suppressor gene p53 regulates multiple cellular responses to DNA damage, but
the transcriptional targets that specify these responses are incompletely understood. We …

[HTML][HTML] Analysis of homeodomain specificities allows the family-wide prediction of preferred recognition sites

…, A Wakabayashi, GD Stormo, MH Brodsky… - Cell, 2008 - cell.com
We describe the comprehensive characterization of homeodomain DNA-binding specificities
from a metazoan genome. The analysis of all 84 independent homeodomains from D. …

Drosophila melanogaster MNK/Chk2 and p53 Regulate Multiple DNA Repair and Apoptotic Pathways following DNA Damage

MH Brodsky, BT Weinert, G Tsang… - … and cellular biology, 2004 - Taylor & Francis
We have used genetic and microarray analysis to determine how ionizing radiation (IR)
induces p53-dependent transcription and apoptosis in Drosophila melanogaster. IR induces …

Detection and characterization of lipid hydroperoxides at picomole levels by high-performance liquid chromatography

Y Yamamoto, MH Brodsky, JC Baker, BN Ames - Analytical Biochemistry, 1987 - Elsevier
A new method for the detection of various lipid hydroperoxides and hydrogen peroxide at the
picomole level has been developed by combining an HPLC system with an ultrasensitive …

A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors

X Meng, MH Brodsky, SA Wolfe - Nature biotechnology, 2005 - nature.com
The DNA-binding specificities of transcription factors can be used to computationally predict
cis-regulatory modules (CRMs) that regulate gene expression 1 . However, the absence of …

FlyFactorSurvey: a database of Drosophila transcription factor binding specificities determined using the bacterial one-hybrid system

…, S Sinha, SA Wolfe, MH Brodsky - Nucleic acids …, 2011 - academic.oup.com
FlyFactorSurvey (http://pgfe.umassmed.edu/TFDBS/) is a database of DNA binding specificities
for Drosophila transcription factors (TFs) primarily determined using the bacterial one-…

[HTML][HTML] CRISPRseek: a bioconductor package to identify target-specific guide RNAs for CRISPR-Cas9 genome-editing systems

LJ Zhu, BR Holmes, N Aronin, MH Brodsky - PloS one, 2014 - journals.plos.org
CRISPR-Cas systems are a diverse family of RNA-protein complexes in bacteria that target
foreign DNA sequences for cleavage. Derivatives of these complexes have been engineered …

A systematic characterization of factors that regulate Drosophila segmentation via a bacterial one-hybrid system

…, A Wakabayashi, S Sinha, MH Brodsky… - Nucleic acids …, 2008 - academic.oup.com
Specificity data for groups of transcription factors (TFs) in a common regulatory network can
be used to computationally identify the location of cis -regulatory modules in a genome. The …

DNA-binding-domain fusions enhance the targeting range and precision of Cas9

…, S Oikemus, AG Derr, M Garber, MH Brodsky… - Nature …, 2015 - nature.com
The CRISPR-Cas9 system is commonly used in biomedical research; however, the precision
of Cas9 is suboptimal for applications that involve editing a large population of cells (for …