User profiles for Miguel Pinheiro

Miguel Pinheiro

Universidade de Aveiro
Verified email at ua.pt
Cited by 2118

[HTML][HTML] Unravelling the diversity of grapevine microbiome

C Pinto, D Pinho, S Sousa, M Pinheiro, C Egas… - PLoS …, 2014 - journals.plos.org
Vitis vinifera is one of the most widely cultivated fruit crops with a great economic impact on
the global industry. As a plant, it is naturally colonised by a wide variety of both prokaryotic …

[HTML][HTML] Metabarcoding is powerful yet still blind: a comparative analysis of morphological and molecular surveys of seagrass communities

DA Cowart, M Pinheiro, O Mouchel, M Maguer, J Grall… - PloS one, 2015 - journals.plos.org
In the context of the sixth wave of extinction, reliable surveys of biodiversity are increasingly
needed to infer the cause and consequences of species and community declines, identify …

Site-related differences in gene expression and bacterial densities in the mussel Bathymodiolus azoricus from the Menez Gwen and Lucky Strike deep-sea …

…, T Cerqueira, C Freitas, V Costa, M Pinheiro… - Fish & Shellfish …, 2014 - Elsevier
The deep-sea hydrothermal vent mussel Bathymodiolus azoricus is a symbiont bearing bivalve
that is found in great abundance at the Menez Gwen and Lucky Strike hydrothermal vent …

[HTML][HTML] Wine fermentation microbiome: a landscape from different Portuguese wine appellations

…, J Fernandes, S Sousa, M Pinheiro… - Frontiers in …, 2015 - frontiersin.org
Grapes and wine musts harbor a complex microbiome, which plays a crucial role in wine
fermentation as it impacts on wine flavour and, consequently, on its final quality and value. …

[HTML][HTML] High-throughput sequencing and analysis of the gill tissue transcriptome from the deep-sea hydrothermal vent mussel Bathymodiolus azoricus

R Bettencourt, M Pinheiro, C Egas, P Gomes, M Afonso… - BMC genomics, 2010 - Springer
Background Bathymodiolus azoricus is a deep-sea hydrothermal vent mussel found in
association with large faunal communities living in chemosynthetic environments at the bottom of …

[HTML][HTML] Comparative context analysis of codon pairs on an ORFeome scale

G Moura, M Pinheiro, R Silva, I Miranda, V Afreixo… - Genome biology, 2005 - Springer
Codon context is an important feature of gene primary structure that modulates mRNA decoding
accuracy. We have developed an analytical software package and a graphical interface …

[HTML][HTML] Genome-scale analysis of the non-cultivable Treponema pallidum reveals extensive within-patient genetic variation

M Pinto, V Borges, M Antelo, M Pinheiro, A Nunes… - Nature …, 2016 - nature.com
Insights into the genomic adaptive traits of Treponema pallidum, the causative bacterium of
syphilis, have long been hampered due to the absence of in vitro culture models and the …

[HTML][HTML] Large scale comparative codon-pair context analysis unveils general rules that fine-tune evolution of mRNA primary structure

G Moura, M Pinheiro, J Arrais, AC Gomes, L Carreto… - Plos one, 2007 - journals.plos.org
Background Codon usage and codon-pair context are important gene primary structure features
that influence mRNA decoding fidelity. In order to identify general rules that shape codon…

Guesstimation of posterior malleolar fractures on lateral plain radiographs

…, P Zbikowski, J Kalb, P Hemmingsson, M Pinheiro… - Injury, 2015 - Elsevier
Background Accurate assessment of articular involvement of the posterior malleolar fracture
fragments in ankle fractures is essential, as this is the leading argument for internal fixation. …

[HTML][HTML] INSaFLU: an automated open web-based bioinformatics suite “from-reads” for influenza whole-genome-sequencing-based surveillance

V Borges, M Pinheiro, P Pechirra, R Guiomar… - Genome Medicine, 2018 - Springer
Background A new era of flu surveillance has already started based on the genetic
characterization and exploration of influenza virus evolution at whole-genome scale. Although this …