Genetic dissection of the α-globin super-enhancer in vivo

…, JOJ Davies, BJ Graham, LLP Hanssen, MT Kassouf… - Nature …, 2016 - nature.com
Many genes determining cell identity are regulated by clusters of Mediator-bound enhancer
elements collectively referred to as super-enhancers. These super-enhancers have been …

Genome-wide identification of TAL1's functional targets: insights into its mechanisms of action in primary erythroid cells

MT Kassouf, JR Hughes, S Taylor… - Genome …, 2010 - genome.cshlp.org
Coordination of cellular processes through the establishment of tissue-specific gene expression
programs is essential for lineage maturation. The basic helix-loop-helix hemopoietic …

Tissue-specific CTCF–cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo

LLP Hanssen, MT Kassouf, AM Oudelaar, D Biggs… - Nature cell …, 2017 - nature.com
The genome is organized via CTCF–cohesin-binding sites, which partition chromosomes into
1–5 megabase (Mb) topologically associated domains (TADs), and further into smaller sub-…

[HTML][HTML] A tissue-specific self-interacting chromatin domain forms independently of enhancer-promoter interactions

…, C Scott, I Szczerbal, C Babbs, MT Kassouf… - Nature …, 2018 - nature.com
Self-interacting chromatin domains encompass genes and their cis-regulatory elements;
however, the three-dimensional form a domain takes, whether this relies on enhancer–promoter …

[HTML][HTML] Reactivation of a developmentally silenced embryonic globin gene

…, J Sloane-Stanley, J Eglinton, MT Kassouf… - Nature …, 2021 - nature.com
The α- and β-globin loci harbor developmentally expressed genes, which are silenced
throughout post-natal life. Reactivation of these genes may offer therapeutic approaches for the …

[HTML][HTML] The mouse alpha-globin cluster: a paradigm for studying genome regulation and organization

AM Oudelaar, RA Beagrie, MT Kassouf… - Current opinion in …, 2021 - Elsevier
The mammalian globin gene clusters provide a paradigm for studying the relationship between
genome structure and function. As blood stem cells undergo lineage specification and …

Differential use of SCL/TAL-1 DNA-binding domain in developmental hematopoiesis

MT Kassouf, H Chagraoui, P Vyas… - Blood, The Journal of …, 2008 - ashpublications.org
Dissecting the molecular mechanisms used by developmental regulators is essential to
understand tissue specification/differentiation. SCL/TAL-1 is a basic helix-loop-helix transcription …

Between form and function: the complexity of genome folding

…, RC Hardison, MT Kassouf… - Human molecular …, 2017 - academic.oup.com
It has been known for over a century that chromatin is not randomly distributed within the
nucleus. However, the question of how DNA is folded and the influence of such folding on …

A functional overlap between actively transcribed genes and chromatin boundary elements

…, JA Sharpe, B Davies, JA Sloane-Stanley, MT Kassouf… - Biorxiv, 2020 - biorxiv.org
Mammalian genomes are subdivided into large (50-2000 kb) regions of chromatin referred to
as Topologically Associating Domains (TADs or sub-TADs). Chromatin within an individual …

Multipartite super-enhancers function in an orientation-dependent manner

MT Kassouf, HS Francis, M Gosden, MC Suciu… - BioRxiv, 2022 - biorxiv.org
Transcriptional enhancers regulate gene expression in a developmental-stage and cell-specific
manner. They were originally defined as individual regulatory elements that activate …