[HTML][HTML] Analysis of super-resolution single molecule localization microscopy data: A tutorial
M Fazel, MJ Wester - AIP advances, 2022 - pubs.aip.org
The diffraction of light imposes a fundamental limit on the resolution of light microscopes. This
limit can be circumvented by creating and exploiting independent behaviors of the sample …
limit can be circumvented by creating and exploiting independent behaviors of the sample …
[HTML][HTML] High-precision estimation of emitter positions using Bayesian grouping of localizations
Single-molecule localization microscopy super-resolution methods rely on stochastic
blinking/binding events, which often occur multiple times from each emitter over the course of data …
blinking/binding events, which often occur multiple times from each emitter over the course of data …
[PDF][PDF] High resolution fluorescence lifetime maps from minimal photon counts
Fluorescence lifetime imaging microscopy (FLIM) can be used to probe concentration profiles
of key marco-molecules within sub-cellular environments. However, current analyses for …
of key marco-molecules within sub-cellular environments. However, current analyses for …
Hessian matrix, specific heats, Nambu brackets, and thermodynamic geometry
SAH Mansoori, B Mirza, M Fazel - Journal of High Energy Physics, 2015 - Springer
As an extension to our earlier work [1], we employ the Nambu brackets to prove that the
divergences of heat capacities correspond to their counterparts in thermodynamic geometry. We …
divergences of heat capacities correspond to their counterparts in thermodynamic geometry. We …
[HTML][HTML] Constipation in Iran: SEPAHAN systematic review No. 5
…, P Daneshpajouhnejad, M Fazel… - … Journal of Preventive …, 2012 - ncbi.nlm.nih.gov
Background: Constipation is physically and mentally troublesome for many patients and has
adverse effects on their quality of life. The aim of the present study was to systematically …
adverse effects on their quality of life. The aim of the present study was to systematically …
Template-free 2D particle fusion in localization microscopy
Methods that fuse multiple localization microscopy images of a single structure can improve
signal-to-noise ratio and resolution, but they generally suffer from template bias or sensitivity …
signal-to-noise ratio and resolution, but they generally suffer from template bias or sensitivity …
[HTML][HTML] Comparing lifeact and phalloidin for super-resolution imaging of actin in fixed cells
Visualizing actin filaments in fixed cells is of great interest for a variety of topics in cell biology
such as cell division, cell movement, and cell signaling. We investigated the possibility of …
such as cell division, cell movement, and cell signaling. We investigated the possibility of …
[PDF][PDF] Single-photon smFRET: II. Application to continuous illumination
Here we adapt the Bayesian nonparametrics (BNP) framework presented in the first companion
article to analyze kinetics from single-photon, single-molecule Förster resonance energy …
article to analyze kinetics from single-photon, single-molecule Förster resonance energy …
[HTML][HTML] Gastroesophageal reflux disease in Iran: SEPAHAN systematic review No. 2
M Fazel, AH Keshteli, P Jahangiri… - … journal of preventive …, 2012 - ncbi.nlm.nih.gov
BACKGROUND: Gastroesophageal reflux disease (GERD) is one of the most prevalent
disorders affecting gastrointestinal tract with a wide range of frequency around the world. In this …
disorders affecting gastrointestinal tract with a wide range of frequency around the world. In this …
[PDF][PDF] Single-photon smFRET. I: Theory and conceptual basis
We present a unified conceptual framework and the associated software package for single-molecule
Förster resonance energy transfer (smFRET) analysis from single-photon arrivals …
Förster resonance energy transfer (smFRET) analysis from single-photon arrivals …