User profiles for Momoe Kato

Momoe Kato

Research Scientist, Lawrence Berkeley National Laboratory
Verified email at lbl.gov
Cited by 1435

Enhancer redundancy provides phenotypic robustness in mammalian development

…, EA Lee, Y Zhu, I Plajzer-Frick, CS Pickle, M Kato… - Nature, 2018 - nature.com
Distant-acting tissue-specific enhancers, which regulate gene expression, vastly outnumber
protein-coding genes in mammalian genomes, but the functional importance of this …

[HTML][HTML] Progressive loss of function in a limb enhancer during snake evolution

…, V Tissières, CS Pickle, I Plajzer-Frick, EA Lee, M Kato… - Cell, 2016 - cell.com
The evolution of body shape is thought to be tightly coupled to changes in regulatory
sequences, but specific molecular events associated with major morphological transitions in …

[HTML][HTML] An atlas of dynamic chromatin landscapes in mouse fetal development

…, V Afzal, JA Akiyama, I Plajzer-Frick, CS Novak, M Kato… - Nature, 2020 - nature.com
The Encyclopedia of DNA Elements (ENCODE) project has established a genomic resource
for mammalian development, profiling a diverse panel of mouse tissues at 8 developmental …

[PDF][PDF] Ultraconserved enhancers are required for normal development

…, EA Lee, AN Harrington, QT Pham, TH Garvin, M Kato… - Cell, 2018 - cell.com
Non-coding "ultraconserved" regions containing hundreds of consecutive bases of perfect
sequence conservation across mammalian genomes can function as distant-acting enhancers…

[PDF][PDF] Comprehensive in vivo interrogation reveals phenotypic impact of human enhancer variants

…, Y Zhu, G Kelman, CS Novak, I Plajzer-Frick, M Kato… - Cell, 2020 - cell.com
Establishing causal links between non-coding variants and human phenotypes is an increasing
challenge. Here, we introduce a high-throughput mouse reporter assay for assessing …

Supervised enhancer prediction with epigenetic pattern recognition and targeted validation

…, I Plajzer-Frick, C Yan, CS Novak, M Kato… - Nature …, 2020 - nature.com
Enhancers are important non-coding elements, but they have traditionally been hard to
characterize experimentally. The development of massively parallel assays allows the …

[HTML][HTML] Genome-wide compendium and functional assessment of in vivo heart enhancers

…, CS Pickle, E Lee, TH Garvin, M Kato… - Nature …, 2016 - nature.com
Whole-genome sequencing is identifying growing numbers of non-coding variants in human
disease studies, but the lack of accurate functional annotations prevents their interpretation. …

Ultraconserved enhancer function does not require perfect sequence conservation

…, CS Novak, AN Harrington, QT Pham, M Kato… - Nature …, 2021 - nature.com
Ultraconserved enhancer sequences show perfect conservation between human and rodent
genomes, suggesting that their functions are highly sensitive to mutation. However, current …

[HTML][HTML] Dynamic enhancer landscapes in human craniofacial development

…, S Tran, I Plajzer-Frick, CS Novak, M Kato… - Nature …, 2024 - nature.com
The genetic basis of human facial variation and craniofacial birth defects remains poorly
understood. Distant-acting transcriptional enhancers control the fine-tuned spatiotemporal …

[PDF][PDF] Genome-wide fetalization of enhancer architecture in heart disease

…, V Afzal, S Tran, I Plajzer-Frick, CS Novak, M Kato… - Cell reports, 2022 - cell.com
Heart disease is associated with re-expression of key transcription factors normally active
only during prenatal development of the heart. However, the impact of this reactivation on the …