User profiles for Morgan Schwartz
Morgan SchwartzPhD Candidate, Caltech Verified email at caltech.edu Cited by 639 |
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning
…, BJ McIntosh, KX Leow, MS Schwartz… - Nature …, 2022 - nature.com
A principal challenge in the analysis of tissue imaging data is cell segmentation—the task of
identifying the precise boundary of every cell in an image. To address this problem we …
identifying the precise boundary of every cell in an image. To address this problem we …
[HTML][HTML] A spatially resolved timeline of the human maternal–fetal interface
…, M Goldston, A Spence, G Miller, M Schwartz… - Nature, 2023 - nature.com
Beginning in the first trimester, fetally derived extravillous trophoblasts (EVTs) invade the
uterus and remodel its spiral arteries, transforming them into large, dilated blood vessels. …
uterus and remodel its spiral arteries, transforming them into large, dilated blood vessels. …
DeepCell Kiosk: scaling deep learning–enabled cellular image analysis with Kubernetes
Deep learning is transforming the analysis of biological images, but applying these models
to large datasets remains challenging. Here we describe the DeepCell Kiosk, cloud-native …
to large datasets remains challenging. Here we describe the DeepCell Kiosk, cloud-native …
Accurate cell tracking and lineage construction in live-cell imaging experiments with deep learning
E Moen, E Borba, G Miller, M Schwartz, D Bannon… - Biorxiv, 2019 - biorxiv.org
Live-cell imaging experiments have opened an exciting window into the behavior of living
systems. While these experiments can produce rich data, the computational analysis of these …
systems. While these experiments can produce rich data, the computational analysis of these …
Ecological characteristics impact PFAS concentrations in a US North Atlantic food web
This is the first comprehensive study of per- and polyfluoroalkyl substances (PFAS) in a
coastal food web of the US North Atlantic, in which we characterize the presence and …
coastal food web of the US North Atlantic, in which we characterize the presence and …
Scaling biological discovery at the interface of deep learning and cellular imaging
Concurrent advances in imaging technologies and deep learning have transformed the nature
and scale of data that can now be collected with imaging. Here we discuss the progress …
and scale of data that can now be collected with imaging. Here we discuss the progress …
Spatiotemporal coordination at the maternal-fetal interface promotes trophoblast invasion and vascular remodeling in the first half of human pregnancy
…, S Warshawsky, H Piyadasa, G Miller, M Schwartz… - Biorxiv, 2021 - biorxiv.org
Beginning in the first trimester, fetally derived extravillous trophoblasts (EVTs) invade the
uterus and remodel its spiral arteries, transforming them into large, dilated blood vessels that …
uterus and remodel its spiral arteries, transforming them into large, dilated blood vessels that …
Dynamic allocation of computational resources for deep learning-enabled cellular image analysis with Kubernetes
Deep learning is transforming the ability of life scientists to extract information from images.
These techniques have better accuracy than conventional approaches and enable …
These techniques have better accuracy than conventional approaches and enable …
[HTML][HTML] Tidal Flushing Rather Than Non-Point Source Nitrogen Pollution Drives Nutrient Dynamics in A Putatively Eutrophic Estuary
The effects of nonpoint source nutrients on estuaries can be difficult to pinpoint, with researchers
often using indicator species, monitoring, and models to detect influence and change. …
often using indicator species, monitoring, and models to detect influence and change. …
[HTML][HTML] A Foundation Model for Cell Segmentation
Cells are the fundamental unit of biological organization, and identifying them in imaging
data-cell segmentation-is a critical task for various cellular imaging experiments. While deep …
data-cell segmentation-is a critical task for various cellular imaging experiments. While deep …