User profiles for Nancy Zhang
Nancy Ruonan ZhangUniversity of Pennsylvania Verified email at wharton.upenn.edu Cited by 13759 |
SAVER: gene expression recovery for single-cell RNA sequencing
In single-cell RNA sequencing (scRNA-seq) studies, only a small fraction of the transcripts
present in each cell are sequenced. This leads to unreliable quantification of genes with low …
present in each cell are sequenced. This leads to unreliable quantification of genes with low …
[HTML][HTML] Bulk tissue cell type deconvolution with multi-subject single-cell expression reference
Abstract Knowledge of cell type composition in disease relevant tissues is an important step
towards the identification of cellular targets of disease. We present MuSiC, a method that …
towards the identification of cellular targets of disease. We present MuSiC, a method that …
Copy number variants in schizophrenia: confirmation of five previous findings and new evidence for 3q29 microdeletions and VIPR2 duplications
Objective: To evaluate previously reported associations of copy number variants (CNVs)
with schizophrenia and to identify additional associations, the authors analyzed CNVs in the …
with schizophrenia and to identify additional associations, the authors analyzed CNVs in the …
[PDF][PDF] Suppression of angiogenesis and tumor growth by selective inhibition of angiopoietin-2
…, M Kelley, L Li, K Sitney, F Martin, JR Sun, N Zhang… - Cancer cell, 2004 - cell.com
Angiopoietin-2 (Ang2) exhibits broad expression in the remodeling vasculature of human
tumors but very limited expression in normal tissues, making it an attractive candidate target for …
tumors but very limited expression in normal tissues, making it an attractive candidate target for …
[HTML][HTML] A nuclear pyruvate dehydrogenase complex is important for the generation of acetyl-CoA and histone acetylation
…, TH Stenson, A Haromy, K Hashimoto, N Zhang… - Cell, 2014 - cell.com
DNA transcription, replication, and repair are regulated by histone acetylation, a process that
requires the generation of acetyl-coenzyme A (CoA). Here, we show that all the subunits of …
requires the generation of acetyl-coenzyme A (CoA). Here, we show that all the subunits of …
A modified Bayes information criterion with applications to the analysis of comparative genomic hybridization data
NR Zhang, DO Siegmund - Biometrics, 2007 - academic.oup.com
In the analysis of data generated by change-point processes, one critical challenge is to
determine the number of change-points. The classic Bayes information criterion (BIC) statistic …
determine the number of change-points. The classic Bayes information criterion (BIC) statistic …
Clinical utility of the combined positive score for programmed death ligand-1 expression and the approval of pembrolizumab for treatment of gastric cancer
K Kulangara, N Zhang, E Corigliano… - … of pathology & …, 2019 - meridian.allenpress.com
Context.— Regulatory approval of pembrolizumab for treatment of gastric and gastroesophageal
junction (G/GEJ) adenocarcinoma required a reproducible scoring method for use of …
junction (G/GEJ) adenocarcinoma required a reproducible scoring method for use of …
Intensive care unit telemedicine: alternate paradigm for providing continuous intensivist care
…, P Pronovost, M Jenckes, N Zhang… - Critical care …, 2000 - journals.lww.com
Objective Intensive care units (ICUs) account for an increasing percentage of hospital
admissions and resource consumption. Adverse events are common in ICU patients and …
admissions and resource consumption. Adverse events are common in ICU patients and …
[HTML][HTML] Organization of the human intestine at single-cell resolution
The intestine is a complex organ that promotes digestion, extracts nutrients, participates in
immune surveillance, maintains critical symbiotic relationships with microbiota and affects …
immune surveillance, maintains critical symbiotic relationships with microbiota and affects …
[PDF][PDF] Opposing functions of interferon coordinate adaptive and innate immune responses to cancer immune checkpoint blockade
Interferon-gamma (IFNG) augments immune function yet promotes T cell exhaustion through
PDL1. How these opposing effects are integrated to impact immune checkpoint blockade (…
PDL1. How these opposing effects are integrated to impact immune checkpoint blockade (…