An unsupervised method for physical cell interaction profiling of complex tissues

N Andrews, JT Serviss, N Geyer, AB Andersson… - Nature …, 2021 - nature.com
Cellular identity in complex multicellular organisms is determined in part by the physical
organization of cells. However, large-scale investigation of the cellular interactome remains …

[PDF][PDF] A highly scalable method for joint whole-genome sequencing and gene-expression profiling of single cells

V Zachariadis, H Cheng, N Andrews, M Enge - Molecular Cell, 2020 - cell.com
To address how genetic variation alters gene expression in complex cell mixtures, we
developed direct nuclear tagmentation and RNA sequencing (DNTR-seq), which enables whole-…

[HTML][HTML] Elastic dosage compensation by X-chromosome upregulation

…, N Papanicolaou, C Coucoravas, N Andrews… - Nature …, 2022 - nature.com
X-chromosome inactivation and X-upregulation are the fundamental modes of chromosome-wide
gene regulation that collectively achieve dosage compensation in mammals, but the …

[PDF][PDF] A neuronal hub binding sleep initiation and body cooling in response to a warm external stimulus

EC Harding, X Yu, A Miao, N Andrews, Y Ma, Z Ye… - Current Biology, 2018 - cell.com
Mammals, including humans, prepare for sleep by nesting and/or curling up, creating
microclimates of skin warmth. To address whether external warmth induces sleep through defined …

Computer tomographic analysis of organ motion caused by respiration and intraoperative pneumoperitoneum in a porcine model for navigated minimally invasive …

F Nickel, HG Kenngott, J Neuhaus, N Andrews… - Surgical …, 2018 - Springer
Background Navigation systems have the potential to facilitate intraoperative orientation
and recognition of anatomical structures. Intraoperative accuracy of navigation in …

Smart3-ATAC: a highly sensitive method for joint accessibility and full-length transcriptome analysis in single cells

H Cheng, H Pui, A Lentini, S Kolbeinsdóttir, N Andrews… - bioRxiv, 2021 - biorxiv.org
Joint single-cell measurements of gene expression and DNA regulatory element activity
holds great promise as a tool to understand transcriptional regulation. Towards this goal we …

" Can I Get Your Digits?": Illegal Acquisition of Wireless Phone Numbers for Sim-Swap Attacks and Wireless Provider Liability

N Andrews - Nw. J. Tech. & Intell. Prop., 2018 - HeinOnline
In a SIM-swap attack, a hacker uses text messages sent to a wireless customer's phone
number to reset passwords and access critical accounts. These SIM-swap attacks are often …

[HTML][HTML] An antisense RNA capable of modulating the expression of the tumor suppressor microRNA-34a

JT Serviss, N Andrews, J Van den Eynden… - Cell death & …, 2018 - nature.com
The microRNA-34a is a well-studied tumor suppressor microRNA (miRNA) and a direct
downstream target of TP53 with roles in several pathways associated with oncogenesis, such as …

Allele-resolved single-cell multi-omics uncovers the dynamics and transcriptional kinetics of X-chromosome upregulation

…, N Papanicolaou, C Coucoravas, N Andrews… - bioRxiv, 2021 - biorxiv.org
X-chromosome inactivation (XCI) and upregulation (XCU) are the major opposing
chromosome-wide modes of gene regulation that collectively achieve dosage compensation in …

X-chromosome upregulation is dynamically linked to the X-inactivation state

A Lentini, C Coucoravas, N Andrews, M Enge, Q Deng… - bioRxiv, 2020 - biorxiv.org
Mammalian X-chromosome dosage balance is regulated by X-chromosome inactivation (XCI)
and X-chromosome upregulation (XCU), but the dynamics of XCU as well as the interplay …