[HTML][HTML] AutoMap is a high performance homozygosity mapping tool using next-generation sequencing data

…, K Cisarova, A Salmaninejad, N Sepahi… - Nature …, 2021 - nature.com
Homozygosity mapping is a powerful method for identifying mutations in patients with recessive
conditions, especially in consanguineous families or isolated populations. Historically, it …

[HTML][HTML] Systems biomedicine of primary and metastatic colorectal cancer reveals potential therapeutic targets

M Piran, N Sepahi, A Moattari, A Rahimi… - Frontiers in …, 2021 - frontiersin.org
Colorectal cancer (CRC) is one of the major causes of cancer deaths across the world.
Patients’ survival at time of diagnosis depends mainly on stage of the tumor. Therefore, …

HSPA1L and HSPA1B gene polymorphisms and haplotypes are associated with idiopathic male infertility in Iranian population

L Kohan, O Tabiee, N Sepahi - … Journal of Obstetrics & Gynecology and …, 2019 - Elsevier
Objective Male infertility is a multifactorial disease resulting from the interaction between the
genetic and environmental factors. Spermatogenic failure accounts for more than half of …

mir-126 rs4636297 and TGFβRI rs334348 functional gene variants are associated with susceptibility to endometriosis and its severity

N Sepahi, L Kohan, AR Jahromi… - gynecological …, 2017 - Taylor & Francis
microRNAs (miRNAs) are negative regulators in a variety of cellular processes that occur in
endometriosis. Therefore, functional polymorphisms in miRNA and miRNA binding sites may …

[HTML][HTML] Whole exome sequencing in 17 consanguineous Iranian pedigrees expands the mutational spectrum of inherited retinal dystrophies

AU Rehman, N Sepahi, N Bedoni, Z Ravesh… - Scientific Reports, 2021 - nature.com
Inherited retinal dystrophies (IRDs) constitute one of the most heterogeneous groups of
Mendelian human disorders. Using autozygome-guided next-generation sequencing methods in …

[HTML][HTML] A Novel Multiplex LAMP Assay for the Rapid and Accurate Diagnosis of Visceral Leishmaniasis Caused by Leishmania infantum from Iran

…, A Ghasemian, A Yazdanpanah, N Sepahi… - Journal of Tropical …, 2023 - hindawi.com
Visceral leishmaniosis (VL) is one of the neglected tropical diseases despite being responsible
for serious clinical symptoms, some of which lead to fatal outcomes. Thus, there is a …

[PDF][PDF] Systems Biomedicine of Colorectal Cancer Reveals Potential Targets for CRC treatment

M Piran, M Piran, N Sepahi, A Rahimi - bioRxiv, 2020 - academia.edu
Colorectal cancer is one of the leading causes of cancer death worldwide. Patients’ survival
at the time of diagnosis depends largely on the stage of the tumor. Therefore, understanding …

The development of NESTED-LAMP method as a novel approach for diagnostic purposes while using Leishmania parasite as the study model

…, A Ghasemian, S Namavari, S Ataei, N Sepahi… - 2023 - researchsquare.com
Loop-mediated isothermal amplification (LAMP) does not require thermal cycler machines
to amplify DNA and has the potential to revolutionize molecular biology by bypassing the …

Pathway mining in functional genomics: An integrative approach to delineate boolean relationships between Src and its targets

M Piran, N Sepahi, M Piran, PL Fernandes… - bioRxiv, 2020 - biorxiv.org
In recent years the volume of biological data has soared. Parallel to this growth, the need for
developing data mining strategies has not met sufficiently. Here we applied data mining …

Gene Expression Signature and Molecular Mechanism of Redox Homeostasis in Colorectal Cancer

M Piran, M Darayee, M Piran, N Sepahi, A Rahimi - bioRxiv, 2020 - biorxiv.org
Cellular redox homeostasis is the important tool for normal cell function and survival. Oxidants,
reductants and antioxidants are the players to maintain cellular homeostasis balance. …