Beyond gene expression: the impact of protein post-translational modifications in bacteria
JA Cain, N Solis, SJ Cordwell - Journal of proteomics, 2014 - Elsevier
The post-translational modification (PTM) of proteins plays a critical role in the regulation of
a broad range of cellular processes in eukaryotes. Yet their role in governing similar systems …
a broad range of cellular processes in eukaryotes. Yet their role in governing similar systems …
Proteolytic Cleavage Mechanisms, Function, and “Omic” Approaches for a Near-Ubiquitous Posttranslational Modification
Proteases enzymatically hydrolyze peptide bonds in substrate proteins, resulting in a
widespread, irreversible posttranslational modification of the protein’s structure and biological …
widespread, irreversible posttranslational modification of the protein’s structure and biological …
Site-Specific Glycan-Peptide Analysis for Determination of N-Glycoproteome Heterogeneity
BL Parker, M Thaysen-Andersen, N Solis… - Journal of proteome …, 2013 - ACS Publications
A combined glycomics and glycoproteomics strategy was developed for the site-specific
analysis of N-linked glycosylation heterogeneity from a complex mammalian protein mixture. …
analysis of N-linked glycosylation heterogeneity from a complex mammalian protein mixture. …
LysargiNase mirrors trypsin for protein C-terminal and methylation-site identification
PF Huesgen, PF Lange, LD Rogers, N Solis… - Nature …, 2015 - nature.com
To improve proteome coverage and protein C-terminal identification, we characterized the
Methanosarcina acetivorans thermophilic proteinase LysargiNase, which cleaves before …
Methanosarcina acetivorans thermophilic proteinase LysargiNase, which cleaves before …
Improved accuracy of cell surface shaving proteomics in Staphylococcus aureus using a false‐positive control
N Solis, MR Larsen, SJ Cordwell - Proteomics, 2010 - Wiley Online Library
Proteolytic treatment of intact bacterial cells is an ideal means for identifying surface‐exposed
peptide epitopes and has potential for the discovery of novel vaccine targets. Cell stability …
peptide epitopes and has potential for the discovery of novel vaccine targets. Cell stability …
N-terminomics TAILS identifies host cell substrates of poliovirus and coxsackievirus B3 3C proteinases that modulate virus infection
Enteroviruses encode proteinases that are essential for processing of the translated viral
polyprotein. In addition, viral proteinases also target host proteins to manipulate cellular …
polyprotein. In addition, viral proteinases also target host proteins to manipulate cellular …
[PDF][PDF] Mechanistic insights into COVID-19 by global analysis of the SARS-CoV-2 3CLpro substrate degradome
The main viral protease (3CL pro ) is indispensable for SARS-CoV-2 replication. We
delineate the human protein substrate landscape of 3CL pro by TAILS substrate-targeted N-…
delineate the human protein substrate landscape of 3CL pro by TAILS substrate-targeted N-…
[HTML][HTML] C-terminal truncation of IFN-γ inhibits proinflammatory macrophage responses and is deficient in autoimmune disease
Controlled macrophage differentiation and activation in the initiation and resolution of
inflammation is crucial for averting progression to chronic inflammatory and autoimmune diseases. …
inflammation is crucial for averting progression to chronic inflammatory and autoimmune diseases. …
[HTML][HTML] Granzyme B is elevated in autoimmune blistering diseases and cleaves key anchoring proteins of the dermal-epidermal junction
In healthy skin, epidermis and dermis are anchored together at the dermal-epidermal junction
(DEJ), a specialized basement membrane pivotal for skin integrity and function. However, …
(DEJ), a specialized basement membrane pivotal for skin integrity and function. However, …
DIPPER, a spatiotemporal proteomics atlas of human intervertebral discs for exploring ageing and degeneration dynamics
V Tam, P Chen, A Yee, N Solis, T Klein, M Kudelko… - Elife, 2020 - elifesciences.org
The spatiotemporal proteome of the intervertebral disc (IVD) underpins its integrity and function.
We present DIPPER, a deep and comprehensive IVD proteomic resource comprising 94 …
We present DIPPER, a deep and comprehensive IVD proteomic resource comprising 94 …