[HTML][HTML] Rapid identification of pathogenic bacteria using Raman spectroscopy and deep learning
…, L Blackmon, SS Jeffrey, M Holodniy, N Banaei… - Nature …, 2019 - nature.com
Raman optical spectroscopy promises label-free bacterial detection, identification, and antibiotic
susceptibility testing in a single step. However, achieving clinically relevant speeds and …
susceptibility testing in a single step. However, achieving clinically relevant speeds and …
New and developing diagnostic technologies for urinary tract infections
…, KE Mach, LMD Shortliffe, N Banaei… - Nature Reviews …, 2017 - nature.com
Timely and accurate identification and determination of the antimicrobial susceptibility of
uropathogens is central to the management of UTIs. Urine dipsticks are fast and amenable to …
uropathogens is central to the management of UTIs. Urine dipsticks are fast and amenable to …
Gamma interferon release assays for detection of Mycobacterium tuberculosis infection
Identification and treatment of latent tuberculosis infection (LTBI) can substantially reduce
the risk of developing active disease. However, there is no diagnostic gold standard for LTBI. …
the risk of developing active disease. However, there is no diagnostic gold standard for LTBI. …
Clinical impact of metagenomic next-generation sequencing of plasma cell-free DNA for the diagnosis of infectious diseases: a multicenter retrospective cohort study
…, J Dien Bard, BA Pinsky, N Banaei - Clinical Infectious …, 2021 - academic.oup.com
Background Metagenomic next-generation sequencing (mNGS) of plasma cell-free DNA
has emerged as an attractive diagnostic modality allowing broad-range pathogen detection, …
has emerged as an attractive diagnostic modality allowing broad-range pathogen detection, …
Electric field-driven microfluidics for rapid CRISPR-based diagnostics and its application to detection of SARS-CoV-2
…, MK Sahoo, CH Huang, N Banaei… - Proceedings of the …, 2020 - National Acad Sciences
The rapid spread of COVID-19 across the world has revealed major gaps in our ability to
respond to new virulent pathogens. Rapid, accurate, and easily configurable molecular …
respond to new virulent pathogens. Rapid, accurate, and easily configurable molecular …
[HTML][HTML] The immunoregulatory landscape of human tuberculosis granulomas
Tuberculosis (TB) in humans is characterized by formation of immune-rich granulomas in
infected tissues, the architecture and composition of which are thought to affect disease …
infected tissues, the architecture and composition of which are thought to affect disease …
Challenges and pitfalls of morphologic identification of fungal infections in histologic and cytologic specimens: a ten-year retrospective review at a single institution
…, JG Montoya, EJ Baron, N Banaei - American journal of …, 2009 - academic.oup.com
Despite the advantages of providing an early presumptive diagnosis, fungal classification by
histopathology can be difficult and may lead to diagnostic error. To assess the accuracy of …
histopathology can be difficult and may lead to diagnostic error. To assess the accuracy of …
Interferon-γ release assay for accurate detection of severe acute respiratory syndrome coronavirus 2 T-cell response
We investigated feasibility and accuracy of an interferon-γ release assay (IGRA) for
detection of T-cell responses to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). …
detection of T-cell responses to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). …
Clinical application and limitations of interferon-γ release assays for the diagnosis of latent tuberculosis infection
…, S Perry, J Parsonnet, N Banaei - Clinical infectious …, 2011 - academic.oup.com
Interferon-release assays (IGRAs) represent advances in tuberculosis immunology and
evolutionary biology. IGRAs were designed to replace tuberculin skin test (TST) for the diagnosis …
evolutionary biology. IGRAs were designed to replace tuberculin skin test (TST) for the diagnosis …
[HTML][HTML] Next-generation sequencing for infectious disease diagnosis and management: a report of the Association for Molecular Pathology
MI Lefterova, CJ Suarez, N Banaei… - The Journal of Molecular …, 2015 - Elsevier
Next-generation sequencing (NGS) technologies are increasingly being used for diagnosis
and monitoring of infectious diseases. Herein, we review the application of NGS in clinical …
and monitoring of infectious diseases. Herein, we review the application of NGS in clinical …