User profiles for Nicole Deflaux

Nicole Deflaux

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Cited by 11629

[HTML][HTML] Analysis of protein-coding genetic variation in 60,706 humans

…, E Pierce-Hoffman, J Berghout, DN Cooper, N Deflaux… - Nature, 2016 - nature.com
Large-scale reference data sets of human genetic variation are critical for the medical and
functional interpretation of DNA sequence changes. Here we describe the aggregation and …

Whole genome sequencing resource identifies 18 new candidate genes for autism spectrum disorder

…, RV Patel, J Whitney, N Deflaux… - Nature …, 2017 - nature.com
We are performing whole-genome sequencing of families with autism spectrum disorder (ASD)
to build a resource (MSSNG) for subcategorizing the phenotypes and underlying genetic …

Genomic architecture of autism from comprehensive whole-genome sequence annotation

…, S Lamoureux, N Hoang, T Selvanayagam, N Deflaux… - Cell, 2022 - cell.com
Fully understanding autism spectrum disorder (ASD) genetics requires whole-genome
sequencing (WGS). We present the latest release of the Autism Speaks MSSNG resource, which …

[PDF][PDF] The All of Us Research Program: data quality, utility, and diversity

…, R Loperena, K Mayo, M Basford, N Deflaux… - Patterns, 2022 - cell.com
The All of Us Research Program seeks to engage at least one million diverse participants to
advance precision medicine and improve human health. We describe here the cloud-based …

Systematic analysis of challenge-driven improvements in molecular prognostic models for breast cancer

…, OM Rueda, J Guinney, NA Deflaux… - Science translational …, 2013 - science.org
Although molecular prognostics in breast cancer are among the most successful examples
of translating genomic analysis to clinical applications, optimal approaches to breast cancer …

JUMP Cell Painting dataset: morphological impact of 136,000 chemical and genetic perturbations

…, C Ch'ng, BA Cimini, DA Clevert, N Deflaux… - Biorxiv, 2023 - biorxiv.org
Image-based profiling has emerged as a powerful technology for various steps in basic
biological and pharmaceutical discovery, but the community has lacked a large, public reference …

[HTML][HTML] Demonstrating paths for unlocking the value of cloud genomics through cross cohort analysis

N Deflaux, MS Selvaraj, HR Condon, K Mayo… - Nature …, 2023 - nature.com
Recently, large scale genomic projects such as All of Us and the UK Biobank have
introduced a new research paradigm where data are stored centrally in cloud-based Trusted …

The ISB Cancer Genomics Cloud: a flexible cloud-based platform for cancer genomics research

…, M Reyes, T Pihl, M Backus, M Bookman, N Deflaux… - Cancer research, 2017 - AACR
The ISB Cancer Genomics Cloud (ISB-CGC) is one of three pilot projects funded by the
National Cancer Institute to explore new approaches to computing on large cancer datasets in a …

Genomic architecture of autism spectrum disorder from comprehensive whole-genome sequence annotation

…, S Lamoureux, N Hoang, T Selvanayagam, N Deflaux… - MedRxiv, 2022 - medrxiv.org
Fully understanding the genetic factors involved in Autism Spectrum Disorder (ASD) requires
whole-genome sequencing (WGS), which theoretically allows the detection of all types of …

Cloud-based interactive analytics for terabytes of genomic variants data

C Pan, G McInnes, N Deflaux, M Snyder… - …, 2017 - academic.oup.com
Motivation Large scale genomic sequencing is now widely used to decipher questions in
diverse realms such as biological function, human diseases, evolution, ecosystems, and …