User profiles for Niraj K. Nirala

Niraj K. Nirala

Instructor, Program in Molecular Medicine, University of Massachusetts Chan Medical …
Verified email at Umassmed.edu
Cited by 404

Drosophila Sirt2/mammalian SIRT3 deacetylates ATP synthase β and regulates complex V activity

…, NK Nirala, A Singh, LJ Zhu, K Taguchi… - Journal of Cell …, 2014 - rupress.org
Adenosine triphosphate (ATP) synthase β, the catalytic subunit of mitochondrial complex V,
synthesizes ATP. We show that ATP synthase β is deacetylated by a human nicotinamide …

TrpA1 is a shear stress mechanosensing channel regulating intestinal stem cell proliferation in Drosophila

J Gong, NK Nirala, J Chen, F Wang, P Gu, Q Wen… - Science …, 2023 - science.org
Adult stem cells are essential for tissue maintenance and repair. Although genetic pathways
for controlling adult stem cells are extensively investigated in various tissues, much less is …

[PDF][PDF] Ingestion of food particles regulates the mechanosensing misshapen-yorkie pathway in Drosophila intestinal growth

Q Li, NK Nirala, Y Nie, HJ Chen, G Ostroff, J Mao… - Developmental cell, 2018 - cell.com
The intestinal epithelium has a high cell turnover rate and is an excellent system to study
stem cell-mediated adaptive growth. In the Drosophila midgut, the Ste20 kinase Misshapen, …

Hinfp is a guardian of the somatic genome by repressing transposable elements

NK Nirala, Q Li, PN Ghule, HJ Chen… - Proceedings of the …, 2021 - National Acad Sciences
Germ cells possess the Piwi-interacting RNA pathway to repress transposable elements
and maintain genome stability across generations. Transposable element mobilization in …

Sphingosine kinases and their metabolites modulate endolysosomal trafficking in photoreceptors

I Yonamine, T Bamba, NK Nirala, N Jesmin… - Journal of cell …, 2011 - rupress.org
Internalized membrane proteins are either transported to late endosomes and lysosomes for
degradation or recycled to the plasma membrane. Although proteins involved in trafficking …

[PDF][PDF] The snakeskin-mesh complex of smooth septate junction restricts yorkie to regulate intestinal homeostasis in Drosophila

HJ Chen, Q Li, NK Nirala, YT Ip - Stem cell reports, 2020 - cell.com
Tight junctions in mammals and septate junctions in insects are essential for epithelial integrity.
We show here that, in the Drosophila intestine, smooth septate junction proteins provide …

[HTML][HTML] Survival response to increased ceramide involves metabolic adaptation through novel regulators of glycolysis and lipolysis

NK Nirala, M Rahman, SM Walls, A Singh, LJ Zhu… - PLoS …, 2013 - journals.plos.org
The sphingolipid ceramide elicits several stress responses, however, organisms survive
despite increased ceramide but how they do so is poorly understood. We demonstrate here that …

[HTML][HTML] dagLogo: An R/Bioconductor package for identifying and visualizing differential amino acid group usage in proteomics data

J Ou, H Liu, NK Nirala, A Stukalov, U Acharya… - PLoS …, 2020 - journals.plos.org
Sequence logos have been widely used as graphical representations of conserved nucleic
acid and protein motifs. Due to the complexity of the amino acid (AA) alphabet, rich post-…

Oncogenic Pathways and Loss of the Rab11 GTPase Synergize To Alter Metabolism in Drosophila

Y Nie, S Yu, Q Li, NK Nirala, A Amcheslavsky… - Genetics, 2019 - academic.oup.com
Colorectal cancer is a complex disease driven by well-established mutations such as APC
and other yet to be identified pathways. The GTPase Rab11 regulates endosomal protein …

The Misshapen subfamily of Ste20 kinases regulate proliferation in the aging mammalian intestinal epithelium

Q Li, NK Nirala, HJ Chen, Y Nie… - Journal of cellular …, 2019 - Wiley Online Library
The intestinal epithelium has a high rate of cell turn over and is an excellent system to study
stem cell‐mediated tissue homeostasis. The Misshapen subfamily of the Ste20 kinases in …