User profiles for Oleh Dzyubachyk

Oleh Dzyubachyk

Leiden University Medical Center
Verified email at lumc.nl
Cited by 4170

Methods for cell and particle tracking

E Meijering, O Dzyubachyk, I Smal - Methods in enzymology, 2012 - Elsevier
Achieving complete understanding of any living thing inevitably requires thorough analysis
of both its anatomic and dynamic properties. Live-cell imaging experiments carried out to this …

Tracking in cell and developmental biology

E Meijering, O Dzyubachyk, I Smal… - Seminars in cell & …, 2009 - Elsevier
The past decade has seen an unprecedented data explosion in biology. It has become
evident that in order to take full advantage of the potential wealth of information hidden in the …

An objective comparison of cell-tracking algorithms

…, I Smal, K Rohr, J Jaldén, HM Blau, O Dzyubachyk… - Nature …, 2017 - nature.com
We present a combined report on the results of three editions of the Cell Tracking Challenge,
an ongoing initiative aimed at promoting the development and objective evaluation of cell …

A benchmark for comparison of cell tracking algorithms

…, J Jaldén, HM Blau, O Dzyubachyk… - …, 2014 - academic.oup.com
Motivation: Automatic tracking of cells in multidimensional time-lapse fluorescence microscopy
is an important task in many biomedical applications. A novel framework for objective …

Advanced level-set-based cell tracking in time-lapse fluorescence microscopy

O Dzyubachyk, WA Van Cappellen… - IEEE transactions on …, 2010 - ieeexplore.ieee.org
Cell segmentation and tracking in time-lapse fluorescence microscopy images is a task of
fundamental importance in many biological studies on cell migration and proliferation. In …

[HTML][HTML] Iron loading is a prominent feature of activated microglia in Alzheimer's disease patients

…, A Somarakis, L de Haan, O Dzyubachyk… - Acta neuropathologica …, 2021 - Springer
Brain iron accumulation has been found to accelerate disease progression in amyloid-β(Aβ)
positive Alzheimer patients, though the mechanism is still unknown. Microglia have been …

Biomedical image analysis competitions: The state of current participation practice

…, R Bao, C Choi, A Cohen, O Dzyubachyk… - arXiv preprint arXiv …, 2022 - arxiv.org
The number of international benchmarking competitions is steadily increasing in various fields
of machine learning (ML) research and practice. So far, however, little is known about the …

The effect of mirabegron on energy expenditure and brown adipose tissue in healthy lean South Asian and Europid men

…, JR Ruiz, J Burakiewicz, O Dzyubachyk… - Diabetes, Obesity …, 2020 - Wiley Online Library
Aim To compare the effects of cold exposure and the β3‐adrenergic receptor agonist mirabegron
on plasma lipids, energy expenditure and brown adipose tissue (BAT) activity in South …

An analysis of the impact of annotation errors on the accuracy of deep learning for cell segmentation

Ş Vădineanu, DM Pelt, O Dzyubachyk… - … on Medical Imaging …, 2022 - proceedings.mlr.press
Recent studies have shown that there can be high inter-and intra-observer variability when
creating annotations for biomedical image segmentation. To mitigate the effects of manual …

Clinically relevant timing of antenatal sildenafil treatment reduces pulmonary vascular remodeling in congenital diaphragmatic hernia

…, AH Koning, O Dzyubachyk… - … of Physiology-Lung …, 2016 - journals.physiology.org
Patients with congenital diaphragmatic hernia (CDH) suffer from severe pulmonary
hypertension attributable to altered development of the pulmonary vasculature, which is often …